Detail information of GWHGAAEX008025/evm.TU.scaffold_21.38


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|297621203|ref|YP_003709340.1|8.00E-20serine/threonine PP2C protein phosphatase [Waddlia chondrophila WSU 86-1044]
KOGKOG06981.00E-173Serine/threonine protein phosphatase
nrgi|672126427|ref|XP_008786663.1|0PREDICTED: probable protein phosphatase 2C 27 isoform X1 [Phoenix dactylifera]
Swissprottr|P93006|P2C27_ARATH4.00E-174Probable protein phosphatase 2C 27
trEMBLtr|A0A061FF32|A0A061FF32_THECC0Phosphatase 2C family protein isoform 1 {ECO:0000313|EMBL:EOY15317.1}
TAIRAT2G337001.00E-173Protein phosphatase 2C family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000022945835949443+
Transcript Sequence

Network for GWHGAAEX008025

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00481.20PP2C1023446.50E-70
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0043169Molecular Functioncation binding
GO:0003824Molecular Functioncatalytic activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms11.000
SRR2545915Juvenile tuber11.800
SRP108465SRR5643513five period of Gastrodia elata21.570
SRR5643514five period of Gastrodia elata22.430
SRR5643515five period of Gastrodia elata20.310
SRR5643524five period of Gastrodia elata20.060
SRR5643525five period of Gastrodia elata26.560
SRR5643528five period of Gastrodia elata27.660
SRR5643658five period of Gastrodia elata27.820
SRR5643659five period of Gastrodia elata15.400
SRR5643660five period of Gastrodia elata16.120
SRR5643661five period of Gastrodia elata14.830
SRR5643662five period of Gastrodia elata15.130
SRR5643663five period of Gastrodia elata17.480
SRR5643664five period of Gastrodia elata14.020
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_133.120
SRR6049655Rhizomagastrodiae_C368-T10_good_129.360
SRR6049656Rhizomagastrodiae_C368-T07_good_136.160
SRR6049657Rhizomagastrodiae_C368-T07_good_128.360
SRR6049658Rhizomagastrodiae_C368-T04_good_127.590
SRR6049659Rhizomagastrodiae_C368-T04_good_127.350
SRR6049660Rhizomagastrodiae_C368-T01_good_129.410
SRR6049661Rhizomagastrodiae_C368-T04_good_129.650
SRR6049662Rhizomagastrodiae_C368-T01_good_134.640
SRR6049663Rhizomagastrodiae_C368-T01_good_130.190
SRR6049664Rhizomagastrodiae_C368-T10_good_135.760
SRR6049665Rhizomagastrodiae_C368-T10_good_135.760
SRP279888GastroGastrodia elata tuber 21.43
JuvenJuvenile tuber13.76
Mother_GastroMother tuber of Gastrodia elata 45.36
Mother_JuvenMother tuber of Juvenile 35.33