Detail information of GWHGAAEX008030/evm.TU.scaffold_21.43


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG13374.00E-128N-methyltransferase
nrgi|672169992|ref|XP_008805044.1|0PREDICTED: protein SET DOMAIN GROUP 40 isoform X2 [Phoenix dactylifera]
Swissprottr|Q6NQJ8|SDG40_ARATH6.00E-154Protein SET DOMAIN GROUP 40
trEMBLtr|M0RUF8|M0RUF8_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr11P22280_001}
TAIRAT5G172404.00E-128SET domain group 40

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000002211326911143476+
Transcript Sequence

Network for GWHGAAEX008030

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00856.27SET612901.10E-10
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilySET

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0005515Molecular Functionprotein binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms7.590
SRR2545915Juvenile tuber11.890
SRP108465SRR5643513five period of Gastrodia elata8.720
SRR5643514five period of Gastrodia elata7.650
SRR5643515five period of Gastrodia elata7.550
SRR5643524five period of Gastrodia elata9.650
SRR5643525five period of Gastrodia elata4.690
SRR5643528five period of Gastrodia elata5.390
SRR5643658five period of Gastrodia elata4.570
SRR5643659five period of Gastrodia elata5.660
SRR5643660five period of Gastrodia elata4.910
SRR5643661five period of Gastrodia elata5.360
SRR5643662five period of Gastrodia elata3.200
SRR5643663five period of Gastrodia elata4.490
SRR5643664five period of Gastrodia elata3.400
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_18.110
SRR6049655Rhizomagastrodiae_C368-T10_good_110.170
SRR6049656Rhizomagastrodiae_C368-T07_good_19.640
SRR6049657Rhizomagastrodiae_C368-T07_good_16.970
SRR6049658Rhizomagastrodiae_C368-T04_good_16.000
SRR6049659Rhizomagastrodiae_C368-T04_good_15.240
SRR6049660Rhizomagastrodiae_C368-T01_good_18.680
SRR6049661Rhizomagastrodiae_C368-T04_good_17.790
SRR6049662Rhizomagastrodiae_C368-T01_good_110.470
SRR6049663Rhizomagastrodiae_C368-T01_good_18.860
SRR6049664Rhizomagastrodiae_C368-T10_good_18.430
SRR6049665Rhizomagastrodiae_C368-T10_good_18.430
SRP279888GastroGastrodia elata tuber 3.53
JuvenJuvenile tuber8.91
Mother_GastroMother tuber of Gastrodia elata 5.77
Mother_JuvenMother tuber of Juvenile 4.32