Detail information of GWHGAAEX008031/evm.TU.scaffold_21.44


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG17211.00E-108FOG: Zn-finger
nrgi|729325633|ref|XP_010534894.1|7.57E-117PREDICTED: zinc finger protein NUTCRACKER-like isoform X2 [Tarenaya hassleriana]
Swissprottr|Q8H1F5|IDD7_ARATH6.00E-109Protein indeterminate-domain 7 {ECO:0000303|PubMed:16784536}
trEMBLtr|A0A072VPA1|A0A072VPA1_MEDTR2.00E-117C2H2 zinc finger protein, putative {ECO:0000313|EMBL:KEH43471.1}
TAIRAT1G551101.00E-108indeterminate(ID)-domain 7

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000002211785021204413-
Transcript Sequence

Network for GWHGAAEX008031

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module2

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyC2H2

KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName
GO:0003676Molecular Functionnucleic acid binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms49.090
SRR2545915Juvenile tuber11.100
SRP108465SRR5643513five period of Gastrodia elata80.750
SRR5643514five period of Gastrodia elata130.430
SRR5643515five period of Gastrodia elata111.860
SRR5643524five period of Gastrodia elata107.600
SRR5643525five period of Gastrodia elata122.760
SRR5643528five period of Gastrodia elata75.670
SRR5643658five period of Gastrodia elata108.240
SRR5643659five period of Gastrodia elata25.840
SRR5643660five period of Gastrodia elata37.480
SRR5643661five period of Gastrodia elata41.460
SRR5643662five period of Gastrodia elata39.530
SRR5643663five period of Gastrodia elata56.930
SRR5643664five period of Gastrodia elata64.510
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1147.610
SRR6049655Rhizomagastrodiae_C368-T10_good_1185.270
SRR6049656Rhizomagastrodiae_C368-T07_good_1127.010
SRR6049657Rhizomagastrodiae_C368-T07_good_1148.090
SRR6049658Rhizomagastrodiae_C368-T04_good_1194.980
SRR6049659Rhizomagastrodiae_C368-T04_good_1222.980
SRR6049660Rhizomagastrodiae_C368-T01_good_1137.830
SRR6049661Rhizomagastrodiae_C368-T04_good_1130.560
SRR6049662Rhizomagastrodiae_C368-T01_good_1102.930
SRR6049663Rhizomagastrodiae_C368-T01_good_1134.410
SRR6049664Rhizomagastrodiae_C368-T10_good_1163.490
SRR6049665Rhizomagastrodiae_C368-T10_good_1163.490
SRP279888GastroGastrodia elata tuber 61.16
JuvenJuvenile tuber50.22
Mother_GastroMother tuber of Gastrodia elata 80.20
Mother_JuvenMother tuber of Juvenile 93.93