Gene detail

Detail information of GWHGAAEX008043/evm.TU.scaffold_21.59

Functional Annotation

Database	Orthologs	E value	Annotation
nr	gi\|672111968\|ref\|XP_008803371.1\|	1.78E-147	PREDICTED: uncharacterized protein LOC103716934 isoform X2 [Phoenix dactylifera]
trEMBL	tr\|M0S0T5\|M0S0T5_MUSAM	5.00E-113	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr1P17770_001}
TAIR	AT5G49220	5.00E-19	Protein of unknown function (DUF789)

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000022	1639631	1697993	-

Transcript Sequence
>GWHTAAEX008043 ATTGTCATTTTTCATTAAACACCCCTCGCTGCTGCGATCTCTACCGGCACTCCATTCATTTCGTGATTTAATCGGAGCCTCGCTGGTGTGATCATACTAAAAATTGGAAAGAAGAAGCAAAAAGGGCAATAGAAAGTGTCATGCCACGTGGTCATGGAAGAACTGTTTTCCTTGCTGATAAGGCTGCAGAAAGACGGAGTTTTGCATTGTCTAGAAGATCCTCTGCGCGGAACGCTCACAATCTTGCTTCAAAGGAAAATCTAGTAGTTGTTCCTGTCTTGAGAAATTGCGAAGAGAGGCGTATTGTACTCAGATTGCTAACACTTGATGTTCATTTGTTGAGTTTGCTGGTCCCTTTCACTTCATTCATTGAAGGGCCTGAAATAAGAAATGAACAGGGTTTTCAAAATTCCGTTAATGCGGACATGTTGAACAGTCCTAATTCATGTTATCCACAGCCAACTATATTCATCCAGCTCGATTTGCAGAAAGAACGGTTCCCTAGTTCTCAGGAAAATTCTGCCATTACTTCTGCTTTTGCTCAGACAGTTTCTGACTGCAAATCCTCTACTCCTAATGTTTGTGAATGCCCCCAGAGACTAACAAATAACAAACCTATTAAGAATACTTTCAAAAACATGTTAGTTACTGCTGCACCGGAGTCCACTCAAGCTAAGTATATCTCTGATTATATAGCTTCAAATGCTTCAGATGATGCCACTATTAAAGTTGATCAAGTTGGAAAACAATGTACTAGAAAGAAAGGGAAAAAGAAGAGAAAACAATATAAAAGGTCCATGCGTAGAAAGACTGTTAAATCGGAAAAGCAAGGAGATGAAGTGGCCTGCAATGCTTCAAAATCCGGAACCTCTACCGGTGGTGATGTAGTTTGCTCCGCCACACATGAGAATAACATGTCTTTGGTTTTAACACGTTCAAGATTTCCTGTTAAAGATACTTCTAGTGAGGTTATGGAGCAAATAGACATAGAATGCAGCGGTAAAGATTATTTAGGCACATTATCATGCTCACCTAGAGAACCTTTGCACAAAACCATCAATGGTTCTAGAAAGCCATTTACTCTGTCTTCTGAATTTTTTGATGATGAGATTGACACGATGTCCTTTGAGGCTGTTACATCGAGTTCAAATAAAGCTTGTGAAACAAAACTGTTAACCTCTCTACAAAAAAAATGTGAGATTGAAATGATGGAAGACTCTGTTAATGATTGCGGAACAGAGTGGTCTGAGGCAAATGATAGTAGATTTAATCCTTTGGCAGATAGGATGGCTTCTAGCTCGAGTAATATATCTGTTCAATGTGAATGTGAGGATCACTCAAATCAGGATAGTAATTTATCCAGCAACGGCTGTGTCAATTTCTTTGACTTGCATAAGGATGTTACAGATAATGATTGCAGTTCCGAAAGACTTTTAACTAGCAGCCAAGCATCTAGCAGTGACTTGCAAAAGGATGTTGCAGACACTGATTGCAGCTCAGAAAGACTTTTAGGTAGCGGTCAAGCATCTAGCAGTGATGATTTTCATCCAGTTATTCGTGGTAAGAGAGGAAGGCTAGCTAGAAAGTTTTCCGGGAGTTTAGAAGGTGTGCATAGGCCCAATAATACCTATGTACATCTATCTTCTGAAGCAGATAATAAACGTTCTATATGGAAAAAGGTAGAAAAGGAAAACTTGTCCGAGTCAGCCTTTCCAAGAACTAATGTCAAAATAGCCTCACAAAACGTAGATATGCCTTTAAAATGCATGGAAACAGGAGCTAGGCAACATAGTAAGTTGAATCAGAATAGGAGTGGAAAATCTTTCAGGTATTCTTCTTCAGGCGTAGTGGATTCTTCTCAGTCATATTCATCCATATTGTCCTCTTTTGTTGAGACAAATTCTGGTAACATTTCATTGGATCGCAGTACATACCTGGAAAAATTGCAAAGGAAGCCCAATTTAGCCTCTGAGCCAGAAAATCTGCCTGCACTGAAAACTAATACAAATAATATCAATGCACCATTTAAAATTCAAGCTCTAAGAATGGAAAAATCAAGTACTGAAGCTAATTTTACTGATGTTTCTCAATTGGCCAGCGGAATGAATTCTTCTTTAAAATTAACTAAGAATTCACCGAACATTTTACAGAATGAAACAGGAACCAACAATATCTGCAGCCTTCCACTCAATGCTTCTTTGTCTCAAAAAATATCAACTAATTCATCAGTTATTGTTTCAAATTCAGATCAAAATTATTCAGATAAAGAATTTCACAGTACTGCACAGACTGTAGATATAAATAACGATCCTTGCAGTATTGCAAGTGTAGAAAATATTCATTGCAAGCGTGTAGAAAGAAAAAGTGGTCAGGTTGAAAGTAGTGGATCAGGAAACAGTTCAGGGTCTCTATTGCAGCAGTTTGTCCCTACTCAGAGAAAGGATTTGTCAATTACTAGGAGCCAATATAATGTTCAGGCATATTCTATCGTGCATGACCCAGCTCCTACTAGTCTAAATTCAACAGCTATTGATGAATTTTCAAAATCAAATTCCCATACTTCTGACTGTTTTCCAACTAGAGAAACACAATTTTCAAACCCGTCCACTAGCTGTATGGATTGCACATGTCCTGAAGTGGATGAAATTATTAACGAACTTGATAGTCAACCTTGCACATTATCTGAGGAGTCTAGAGATTGCTCATCATCTGATTTCTGTTTCTCTCAAAAAATAACGGAATCACTTTTTGCAGCTTGTGAAACTGATTTGACTAAGATAATTGAGGCAGTCGATAGATCTTATAAATTATTGGTTGCTGATGAGGATGTTCAGCTGACTATGGGTAGTACAGTGTCTGGATTTGAGAAAATATTACATTCTGCATCGCCAGTTATTGATTTAGGCTGCATTAGTATGTGCAATATCTGCTGTCAGAATCAAATCATTGGAGATTCTTTGTGTATCCATCAAGTTCCCAATATCTCACTGAGAAGACTATGGCAATGGTATGAGAAGCCCGGCAGTTATGGATTGGAAGTAAAGGTACATGACTTGCACGCTCCAAAGAGATCACGGACTGGTCTTCACAAGTTTTGTGCATATTTTGTACCATATCTTTCTGCTGTTCAATTGTTTGCCCGGTCTGGAAAGCCCCTTTTTAATCCTAACAATGATACTGTAGAGGATTTGAGAAAAACTTTTGAAGTTTGTGGAACATTCAAATGTCCAGCAAGCTTAGCTTCACTTCCTATCTTCTCAAAGCTTCTGCCACAATCATCTAAAAAAGAAGATACAGGGCCATCAAGCAAAGGCGAAGAATTCAATAAGACTGTTTTTAAGGAACAATTGGCTGGTGAATTGTTATTTGAGTATTTTGAATCTGATCAACCACAGCAACGAAGACCATTATTTGAAAAGATTAATGAGCTTATACGTGGTGATTCATTATCTAAATGCCATCATTATGGGGAGTCTTCAAAGTTGGAATGCCTAAATCTGAATGAACTGCACCCTTCCTCTTGGTATGCTGTTGCATGGTATCCTATCTATCGGATACCTGAGGGAAATTTCCGTGCTGCATTTTTAACATATCATTCTTTTGGCCGCATTGTTTGCAGAAGCACCACAAGTAGTGCTGATGGTTGCATCAATACTCTAATCTCGCCAGTTGTAGGTCTACAAAGTTACAATGCACAGGGGGAATGCTGGTTTGATCCAACAGGTAGGAACTCGGATGCCATAGAAAAATTTAAGGGCAGGCTGCAGACTCTGGAAAGAGCCGCTAGTGCGATGTCTAGGGCCACTGTGCACCGGGGCGCTCTCAGCAGCACCAATAAACACCCGGATTTTGAGTTCTTTCTCTCCCGAAAACGGTAACATAATATTATATTTTTATGGTTTCCTTATTTCCTTTTCTAAGTTTTGTTTTTGCAATGGGGAGAGAAGAACTACGCCTACTCATCACTTGTTTATGTTTTTGTACCTGAATGAGAGACAGTAGTGAGGAATGCATAGCGAAACATTCTTTTTTCTCTTTTTTTAATTTTAAATAAATAAATAAATAAATA

Network for GWHGAAEX008043

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF05623.11	DUF789	907	1240	4.90E-68

Protein Sequence

>GWHPAAEX008043
MPRGHGRTVFLADKAAERRSFALSRRSSARNAHNLASKENLVVVPVLRNCEERRIVLRLLTLDVHLLSLLVPFTSFIEGPEIRNEQGFQNSVNADMLNSPNSCYPQPTIFIQLDLQKERFPSSQENSAITSAFAQTVSDCKSSTPNVCECPQRLTNNKPIKNTFKNMLVTAAPESTQAKYISDYIASNASDDATIKVDQVGKQCTRKKGKKKRKQYKRSMRRKTVKSEKQGDEVACNASKSGTSTGGDVVCSATHENNMSLVLTRSRFPVKDTSSEVMEQIDIECSGKDYLGTLSCSPREPLHKTINGSRKPFTLSSEFFDDEIDTMSFEAVTSSSNKACETKLLTSLQKKCEIEMMEDSVNDCGTEWSEANDSRFNPLADRMASSSSNISVQCECEDHSNQDSNLSSNGCVNFFDLHKDVTDNDCSSERLLTSSQASSSDLQKDVADTDCSSERLLGSGQASSSDDFHPVIRGKRGRLARKFSGSLEGVHRPNNTYVHLSSEADNKRSIWKKVEKENLSESAFPRTNVKIASQNVDMPLKCMETGARQHSKLNQNRSGKSFRYSSSGVVDSSQSYSSILSSFVETNSGNISLDRSTYLEKLQRKPNLASEPENLPALKTNTNNINAPFKIQALRMEKSSTEANFTDVSQLASGMNSSLKLTKNSPNILQNETGTNNICSLPLNASLSQKISTNSSVIVSNSDQNYSDKEFHSTAQTVDINNDPCSIASVENIHCKRVERKSGQVESSGSGNSSGSLLQQFVPTQRKDLSITRSQYNVQAYSIVHDPAPTSLNSTAIDEFSKSNSHTSDCFPTRETQFSNPSTSCMDCTCPEVDEIINELDSQPCTLSEESRDCSSSDFCFSQKITESLFAACETDLTKIIEAVDRSYKLLVADEDVQLTMGSTVSGFEKILHSASPVIDLGCISMCNICCQNQIIGDSLCIHQVPNISLRRLWQWYEKPGSYGLEVKVHDLHAPKRSRTGLHKFCAYFVPYLSAVQLFARSGKPLFNPNNDTVEDLRKTFEVCGTFKCPASLASLPIFSKLLPQSSKKEDTGPSSKGEEFNKTVFKEQLAGELLFEYFESDQPQQRRPLFEKINELIRGDSLSKCHHYGESSKLECLNLNELHPSSWYAVAWYPIYRIPEGNFRAAFLTYHSFGRIVCRSTTSSADGCINTLISPVVGLQSYNAQGECWFDPTGRNSDAIEKFKGRLQTLERAASAMSRATVHRGALSSTNKHPDFEFFLSRKR

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	50.730
SRP064423	SRR2545915	Juvenile tuber	43.920
SRP108465	SRR5643513	five period of Gastrodia elata	17.640
	SRR5643514	five period of Gastrodia elata	18.490
	SRR5643515	five period of Gastrodia elata	15.260
	SRR5643524	five period of Gastrodia elata	19.490
	SRR5643525	five period of Gastrodia elata	15.420
	SRR5643528	five period of Gastrodia elata	17.900
	SRR5643658	five period of Gastrodia elata	15.610
	SRR5643659	five period of Gastrodia elata	17.660
	SRR5643660	five period of Gastrodia elata	20.830
	SRR5643661	five period of Gastrodia elata	18.210
	SRR5643662	five period of Gastrodia elata	17.220
	SRR5643663	five period of Gastrodia elata	21.330
	SRR5643664	five period of Gastrodia elata	20.450
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	25.980
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	32.130
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	23.880
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	29.810
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	29.410
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	37.370
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	26.000
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	30.230
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	19.060
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	21.710
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	24.450
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	24.450
SRP279888	Gastro	Gastrodia elata tuber	25.97
	Juven	Juvenile tuber	36.59
	Mother_Gastro	Mother tuber of Gastrodia elata	16.23
	Mother_Juven	Mother tuber of Juvenile	35.68