Detail information of GWHGAAEX008046/evm.TU.scaffold_21.64


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|720036768|ref|XP_010267462.1|4.88E-41PREDICTED: uncharacterized protein LOC104604694 isoform X2 [Nelumbo nucifera]
trEMBLtr|A0A068UBJ4|A0A068UBJ4_COFCA3.00E-38Coffea canephora
TAIRAT3G150403.00E-16Protein of unknown function, DUF584

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000002219608521962831+
Transcript Sequence

Network for GWHGAAEX008046

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF04520.12Senescence_reg422137.60E-36
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms34.950
SRR2545915Juvenile tuber43.840
SRP108465SRR5643513five period of Gastrodia elata29.840
SRR5643514five period of Gastrodia elata44.590
SRR5643515five period of Gastrodia elata18.390
SRR5643524five period of Gastrodia elata28.390
SRR5643525five period of Gastrodia elata158.740
SRR5643528five period of Gastrodia elata81.760
SRR5643658five period of Gastrodia elata95.690
SRR5643659five period of Gastrodia elata8.510
SRR5643660five period of Gastrodia elata14.690
SRR5643661five period of Gastrodia elata8.860
SRR5643662five period of Gastrodia elata23.400
SRR5643663five period of Gastrodia elata11.440
SRR5643664five period of Gastrodia elata16.370
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_146.480
SRR6049655Rhizomagastrodiae_C368-T10_good_180.500
SRR6049656Rhizomagastrodiae_C368-T07_good_147.360
SRR6049657Rhizomagastrodiae_C368-T07_good_155.690
SRR6049658Rhizomagastrodiae_C368-T04_good_164.630
SRR6049659Rhizomagastrodiae_C368-T04_good_164.680
SRR6049660Rhizomagastrodiae_C368-T01_good_143.230
SRR6049661Rhizomagastrodiae_C368-T04_good_143.560
SRR6049662Rhizomagastrodiae_C368-T01_good_136.550
SRR6049663Rhizomagastrodiae_C368-T01_good_137.890
SRR6049664Rhizomagastrodiae_C368-T10_good_152.730
SRR6049665Rhizomagastrodiae_C368-T10_good_152.730
SRP279888GastroGastrodia elata tuber 30.83
JuvenJuvenile tuber215.56
Mother_GastroMother tuber of Gastrodia elata 150.18
Mother_JuvenMother tuber of Juvenile 313.63