Detail information of GWHGAAEX008047/evm.TU.scaffold_21.66


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|325110152|ref|YP_004271220.1|1.00E-33oligopeptide transporter [Planctomyces brasiliensis DSM 5305]
nrgi|743777793|ref|XP_010919337.1|0PREDICTED: LOW QUALITY PROTEIN: probable metal-nicotianamine transporter YSL9 [Elaeis guineensis]
Swissprottr|Q2EF88|YSL3_ARATH0Metal-nicotianamine transporter YSL3
trEMBLtr|A0A061G3D2|A0A061G3D2_THECC0YELLOW STRIPE like 3 isoform 2 {ECO:0000313|EMBL:EOY23662.1}
TAIRAT5G535500YELLOW STRIPE like 3

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000002219854531990381-
Transcript Sequence

Network for GWHGAAEX008047

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module3

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03169.14OPT376491.30E-143
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0055085Biological Processtransmembrane transport

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms58.890
SRR2545915Juvenile tuber18.340
SRP108465SRR5643513five period of Gastrodia elata58.750
SRR5643514five period of Gastrodia elata76.140
SRR5643515five period of Gastrodia elata54.790
SRR5643524five period of Gastrodia elata59.150
SRR5643525five period of Gastrodia elata175.020
SRR5643528five period of Gastrodia elata77.740
SRR5643658five period of Gastrodia elata76.240
SRR5643659five period of Gastrodia elata15.790
SRR5643660five period of Gastrodia elata19.030
SRR5643661five period of Gastrodia elata15.170
SRR5643662five period of Gastrodia elata16.930
SRR5643663five period of Gastrodia elata21.560
SRR5643664five period of Gastrodia elata24.190
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_167.400
SRR6049655Rhizomagastrodiae_C368-T10_good_157.050
SRR6049656Rhizomagastrodiae_C368-T07_good_153.560
SRR6049657Rhizomagastrodiae_C368-T07_good_168.080
SRR6049658Rhizomagastrodiae_C368-T04_good_186.570
SRR6049659Rhizomagastrodiae_C368-T04_good_1104.120
SRR6049660Rhizomagastrodiae_C368-T01_good_155.360
SRR6049661Rhizomagastrodiae_C368-T04_good_156.480
SRR6049662Rhizomagastrodiae_C368-T01_good_159.410
SRR6049663Rhizomagastrodiae_C368-T01_good_164.390
SRR6049664Rhizomagastrodiae_C368-T10_good_175.050
SRR6049665Rhizomagastrodiae_C368-T10_good_175.050
SRP279888GastroGastrodia elata tuber 29.09
JuvenJuvenile tuber85.92
Mother_GastroMother tuber of Gastrodia elata 131.53
Mother_JuvenMother tuber of Juvenile 79.29