Detail information of GWHGAAEX008048/evm.TU.scaffold_21.67
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|374310100|ref|YP_005056530.1| | 7.00E-08 | glycoside hydrolase family protein [Granulicella mallensis MP5ACTX8] |
| KOG | KOG0239 | 0 | Kinesin (KAR3 subfamily) |
| nr | gi|672167934|ref|XP_008803947.1| | 0 | PREDICTED: kinesin-like protein KIF3C [Phoenix dactylifera] |
| Swissprot | tr|O81635|ATK4_ARATH | 4.00E-102 | Kinesin-4 |
| trEMBL | tr|M0RWW2|M0RWW2_MUSAM | 0 | Kinesin-like protein {ECO:0000256|RuleBase:RU000394} |
| TAIR | AT2G22610 | 0 | Di-glucose binding protein with Kinesin motor domain |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000022 | 2027269 | 2034825 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX008048
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF11721.7 | Malectin | 37 | 181 | 6.70E-25 |
| PF00225.22 | Kinesin | 379 | 695 | 3.10E-110 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0007018 | Biological Process | microtubule-based movement |
| GO:0005524 | Molecular Function | ATP binding |
| GO:0003777 | Molecular Function | microtubule motor activity |
| GO:0008017 | Molecular Function | microtubule binding |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 0.370 |
| SRR2545915 | Juvenile tuber | 0.270 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 0.390 |
| SRR5643514 | five period of Gastrodia elata | 1.480 | |
| SRR5643515 | five period of Gastrodia elata | 0.470 | |
| SRR5643524 | five period of Gastrodia elata | 0.930 | |
| SRR5643525 | five period of Gastrodia elata | 0.750 | |
| SRR5643528 | five period of Gastrodia elata | 0.460 | |
| SRR5643658 | five period of Gastrodia elata | 0.560 | |
| SRR5643659 | five period of Gastrodia elata | 0.000 | |
| SRR5643660 | five period of Gastrodia elata | 0.100 | |
| SRR5643661 | five period of Gastrodia elata | 0.100 | |
| SRR5643662 | five period of Gastrodia elata | 0.020 | |
| SRR5643663 | five period of Gastrodia elata | 0.010 | |
| SRR5643664 | five period of Gastrodia elata | 0.040 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 0.380 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 1.500 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 0.570 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 0.660 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 0.230 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 0.190 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 0.300 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 0.860 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 1.900 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 0.410 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 0.590 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 0.590 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 0.10 |
| Juven | Juvenile tuber | 0.08 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 0.07 | |
| Mother_Juven | Mother tuber of Juvenile | 0.02 |