Detail information of GWHGAAEX008049/evm.TU.scaffold_21.68
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|15615067|ref|NP_243370.1| | 1.00E-25 | serine/threonine protein kinase [Bacillus halodurans C-125] |
| KOG | KOG0582 | 0 | Ste20-like serine/threonine protein kinase |
| nr | gi|743777787|ref|XP_010919333.1| | 0 | PREDICTED: serine/threonine-protein kinase sid1-like isoform X1 [Elaeis guineensis] |
| Swissprot | tr|O23304|BLUS1_ARATH | 2.00E-95 | Serine/threonine-protein kinase BLUS1 |
| trEMBL | tr|V4TRF6|V4TRF6_9ROSI | 0 | Uncharacterized protein {ECO:0000313|EMBL:ESR52476.1} |
| TAIR | AT4G10730 | 0 | Protein kinase superfamily protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000022 | 2046691 | 2120608 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX008049
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00069.24 | Pkinase | 133 | 394 | 1.60E-58 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | STE_STE20-Fray |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006468 | Biological Process | protein phosphorylation |
| GO:0004672 | Molecular Function | protein kinase activity |
| GO:0005524 | Molecular Function | ATP binding |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 36.920 |
| SRR2545915 | Juvenile tuber | 28.390 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 17.680 |
| SRR5643514 | five period of Gastrodia elata | 17.870 | |
| SRR5643515 | five period of Gastrodia elata | 18.560 | |
| SRR5643524 | five period of Gastrodia elata | 16.970 | |
| SRR5643525 | five period of Gastrodia elata | 18.680 | |
| SRR5643528 | five period of Gastrodia elata | 16.210 | |
| SRR5643658 | five period of Gastrodia elata | 15.040 | |
| SRR5643659 | five period of Gastrodia elata | 15.290 | |
| SRR5643660 | five period of Gastrodia elata | 15.240 | |
| SRR5643661 | five period of Gastrodia elata | 14.110 | |
| SRR5643662 | five period of Gastrodia elata | 17.020 | |
| SRR5643663 | five period of Gastrodia elata | 16.090 | |
| SRR5643664 | five period of Gastrodia elata | 18.120 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 20.280 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 15.780 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 16.890 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 22.370 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 29.190 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 32.780 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 24.020 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 23.580 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 15.030 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 21.020 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 18.070 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 18.070 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 16.32 |
| Juven | Juvenile tuber | 24.81 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 17.03 | |
| Mother_Juven | Mother tuber of Juvenile | 22.63 |