Detail information of GWHGAAEX008055/evm.TU.scaffold_21.74


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG13630Predicted regulator of the ubiquitin pathway (contains UAS and UBX domains)
nrgi|743777720|ref|XP_010919299.1|0PREDICTED: FAS-associated factor 2-like [Elaeis guineensis]
trEMBLtr|A0A061G2X5|A0A061G2X5_THECC0UBX domain-containing protein {ECO:0000313|EMBL:EOY23936.1}
TAIRAT4G107900UBX domain-containing protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000002221775192187191-
Transcript Sequence

Network for GWHGAAEX008055

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF14555.5UBA_411528.60E-12
PF00789.19UBX3914684.70E-17
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0005515Molecular Functionprotein binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms31.890
SRR2545915Juvenile tuber33.760
SRP108465SRR5643513five period of Gastrodia elata73.810
SRR5643514five period of Gastrodia elata63.650
SRR5643515five period of Gastrodia elata74.220
SRR5643524five period of Gastrodia elata74.350
SRR5643525five period of Gastrodia elata84.660
SRR5643528five period of Gastrodia elata110.940
SRR5643658five period of Gastrodia elata63.050
SRR5643659five period of Gastrodia elata77.990
SRR5643660five period of Gastrodia elata83.770
SRR5643661five period of Gastrodia elata83.070
SRR5643662five period of Gastrodia elata87.080
SRR5643663five period of Gastrodia elata72.280
SRR5643664five period of Gastrodia elata70.490
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_168.810
SRR6049655Rhizomagastrodiae_C368-T10_good_171.710
SRR6049656Rhizomagastrodiae_C368-T07_good_167.880
SRR6049657Rhizomagastrodiae_C368-T07_good_169.510
SRR6049658Rhizomagastrodiae_C368-T04_good_163.280
SRR6049659Rhizomagastrodiae_C368-T04_good_160.490
SRR6049660Rhizomagastrodiae_C368-T01_good_162.400
SRR6049661Rhizomagastrodiae_C368-T04_good_160.410
SRR6049662Rhizomagastrodiae_C368-T01_good_171.520
SRR6049663Rhizomagastrodiae_C368-T01_good_167.580
SRR6049664Rhizomagastrodiae_C368-T10_good_181.750
SRR6049665Rhizomagastrodiae_C368-T10_good_181.750
SRP279888GastroGastrodia elata tuber 102.52
JuvenJuvenile tuber113.92
Mother_GastroMother tuber of Gastrodia elata 153.25
Mother_JuvenMother tuber of Juvenile 152.58