Detail information of GWHGAAEX008067/evm.TU.scaffold_21.89


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743844461|ref|XP_010938352.1|1.88E-32PREDICTED: uncharacterized protein LOC105057443 [Elaeis guineensis]
trEMBLtr|U5G9Y1|U5G9Y1_POPTR2.00E-29Uncharacterized protein {ECO:0000313|EMBL:ERP60235.1} (Fragment)
TAIRAT1G562602.00E-23Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000002225068872528304+
Transcript Sequence

Network for GWHGAAEX008067

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF15490.5Ten1_21812698.10E-23
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0003697Molecular Functionsingle-stranded DNA binding
GO:1990879Cellular ComponentCST complex

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms0.750
SRR2545915Juvenile tuber1.440
SRP108465SRR5643513five period of Gastrodia elata0.690
SRR5643514five period of Gastrodia elata0.600
SRR5643515five period of Gastrodia elata0.640
SRR5643524five period of Gastrodia elata0.380
SRR5643525five period of Gastrodia elata0.810
SRR5643528five period of Gastrodia elata0.700
SRR5643658five period of Gastrodia elata1.220
SRR5643659five period of Gastrodia elata0.650
SRR5643660five period of Gastrodia elata0.510
SRR5643661five period of Gastrodia elata1.040
SRR5643662five period of Gastrodia elata0.510
SRR5643663five period of Gastrodia elata0.160
SRR5643664five period of Gastrodia elata0.660
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_11.150
SRR6049655Rhizomagastrodiae_C368-T10_good_10.360
SRR6049656Rhizomagastrodiae_C368-T07_good_10.780
SRR6049657Rhizomagastrodiae_C368-T07_good_10.790
SRR6049658Rhizomagastrodiae_C368-T04_good_10.700
SRR6049659Rhizomagastrodiae_C368-T04_good_10.470
SRR6049660Rhizomagastrodiae_C368-T01_good_10.440
SRR6049661Rhizomagastrodiae_C368-T04_good_11.190
SRR6049662Rhizomagastrodiae_C368-T01_good_10.490
SRR6049663Rhizomagastrodiae_C368-T01_good_10.640
SRR6049664Rhizomagastrodiae_C368-T10_good_10.620
SRR6049665Rhizomagastrodiae_C368-T10_good_10.620
SRP279888GastroGastrodia elata tuber 0.69
JuvenJuvenile tuber0.35
Mother_GastroMother tuber of Gastrodia elata 0.61
Mother_JuvenMother tuber of Juvenile 0.05