Detail information of GWHGAAEX008068/evm.TU.scaffold_21.90


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|720000644|ref|XP_010256092.1|6.01E-45PREDICTED: uncharacterized protein LOC104596560 [Nelumbo nucifera]
trEMBLtr|D7T702|D7T702_VITVI3.00E-42Putative uncharacterized protein {ECO:0000313|EMBL:CBI26273.3}
TAIRAT3G225403.00E-36Protein of unknown function (DUF1677)

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000002225430742543696+
Transcript Sequence

Network for GWHGAAEX008068

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module5

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF07911.12DUF1677241123.50E-34
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms7.890
SRR2545915Juvenile tuber9.960
SRP108465SRR5643513five period of Gastrodia elata87.060
SRR5643514five period of Gastrodia elata63.760
SRR5643515five period of Gastrodia elata34.640
SRR5643524five period of Gastrodia elata80.000
SRR5643525five period of Gastrodia elata3.290
SRR5643528five period of Gastrodia elata0.710
SRR5643658five period of Gastrodia elata0.130
SRR5643659five period of Gastrodia elata5.100
SRR5643660five period of Gastrodia elata2.960
SRR5643661five period of Gastrodia elata6.460
SRR5643662five period of Gastrodia elata2.520
SRR5643663five period of Gastrodia elata3.330
SRR5643664five period of Gastrodia elata1.300
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_116.770
SRR6049655Rhizomagastrodiae_C368-T10_good_146.180
SRR6049656Rhizomagastrodiae_C368-T07_good_135.360
SRR6049657Rhizomagastrodiae_C368-T07_good_122.780
SRR6049658Rhizomagastrodiae_C368-T04_good_113.970
SRR6049659Rhizomagastrodiae_C368-T04_good_113.790
SRR6049660Rhizomagastrodiae_C368-T01_good_115.930
SRR6049661Rhizomagastrodiae_C368-T04_good_133.410
SRR6049662Rhizomagastrodiae_C368-T01_good_132.020
SRR6049663Rhizomagastrodiae_C368-T01_good_115.750
SRR6049664Rhizomagastrodiae_C368-T10_good_136.650
SRR6049665Rhizomagastrodiae_C368-T10_good_136.650
SRP279888GastroGastrodia elata tuber 5.88
JuvenJuvenile tuber33.15
Mother_GastroMother tuber of Gastrodia elata 65.54
Mother_JuvenMother tuber of Juvenile 11.58