Detail information of GWHGAAEX008069/evm.TU.scaffold_21.91
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|189502744|ref|YP_001958461.1| | 2.00E-43 | hypothetical protein Aasi_1443 [Candidatus Amoebophilus asiaticus 5a2] |
| KOG | KOG0192 | 0 | Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs |
| nr | gi|743824386|ref|XP_010932768.1| | 0 | PREDICTED: serine/threonine-protein kinase EDR1-like [Elaeis guineensis] |
| Swissprot | tr|Q9FPR3|EDR1_ARATH | 0 | Serine/threonine-protein kinase EDR1 |
| trEMBL | tr|Q76BL0|Q76BL0_9MAGN | 0 | Enhanced disease resistance 1 {ECO:0000313|EMBL:BAD02482.1} |
| TAIR | AT1G08720 | 0 | Protein kinase superfamily protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000022 | 2545672 | 2584797 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX008069
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF14381.5 | EDR1 | 124 | 322 | 4.50E-68 |
| PF07714.16 | Pkinase_Tyr | 686 | 938 | 2.60E-62 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | TKL_CTR1-DRK-2 |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006468 | Biological Process | protein phosphorylation |
| GO:0005524 | Molecular Function | ATP binding |
| GO:0004672 | Molecular Function | protein kinase activity |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 27.200 |
| SRR2545915 | Juvenile tuber | 18.840 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 16.070 |
| SRR5643514 | five period of Gastrodia elata | 12.220 | |
| SRR5643515 | five period of Gastrodia elata | 15.660 | |
| SRR5643524 | five period of Gastrodia elata | 14.010 | |
| SRR5643525 | five period of Gastrodia elata | 22.210 | |
| SRR5643528 | five period of Gastrodia elata | 21.570 | |
| SRR5643658 | five period of Gastrodia elata | 20.540 | |
| SRR5643659 | five period of Gastrodia elata | 14.330 | |
| SRR5643660 | five period of Gastrodia elata | 14.410 | |
| SRR5643661 | five period of Gastrodia elata | 14.040 | |
| SRR5643662 | five period of Gastrodia elata | 13.990 | |
| SRR5643663 | five period of Gastrodia elata | 12.100 | |
| SRR5643664 | five period of Gastrodia elata | 14.750 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 16.330 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 17.760 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 14.330 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 17.400 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 19.970 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 19.480 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 16.730 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 19.000 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 14.420 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 16.200 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 16.000 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 16.000 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 16.88 |
| Juven | Juvenile tuber | 19.26 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 26.32 | |
| Mother_Juven | Mother tuber of Juvenile | 28.38 |