Detail information of GWHGAAEX008073/evm.TU.scaffold_21.96


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743824344|ref|XP_010932758.1|3.32E-36PREDICTED: transcription repressor OFP12-like [Elaeis guineensis]
Swissprottr|F4I8R6|OFP12_ARATH3.00E-23Transcription repressor OFP12
trEMBLtr|M0SLX5|M0SLX5_MUSAM2.00E-33Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr4P07580_001}
TAIRAT1G054201.00E-22ovate family protein 12

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000002228401912840905+
Transcript Sequence

Network for GWHGAAEX008073

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module2

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF04844.12Ovate1081705.20E-21
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyOFP

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms0.260
SRR2545915Juvenile tuber0.440
SRP108465SRR5643513five period of Gastrodia elata0.850
SRR5643514five period of Gastrodia elata0.860
SRR5643515five period of Gastrodia elata0.530
SRR5643524five period of Gastrodia elata1.050
SRR5643525five period of Gastrodia elata1.450
SRR5643528five period of Gastrodia elata0.860
SRR5643658five period of Gastrodia elata0.980
SRR5643659five period of Gastrodia elata0.460
SRR5643660five period of Gastrodia elata1.390
SRR5643661five period of Gastrodia elata0.900
SRR5643662five period of Gastrodia elata0.510
SRR5643663five period of Gastrodia elata0.390
SRR5643664five period of Gastrodia elata1.180
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_15.730
SRR6049655Rhizomagastrodiae_C368-T10_good_19.170
SRR6049656Rhizomagastrodiae_C368-T07_good_14.110
SRR6049657Rhizomagastrodiae_C368-T07_good_14.230
SRR6049658Rhizomagastrodiae_C368-T04_good_12.930
SRR6049659Rhizomagastrodiae_C368-T04_good_10.600
SRR6049660Rhizomagastrodiae_C368-T01_good_13.350
SRR6049661Rhizomagastrodiae_C368-T04_good_15.480
SRR6049662Rhizomagastrodiae_C368-T01_good_17.820
SRR6049663Rhizomagastrodiae_C368-T01_good_13.550
SRR6049664Rhizomagastrodiae_C368-T10_good_15.740
SRR6049665Rhizomagastrodiae_C368-T10_good_15.740
SRP279888GastroGastrodia elata tuber 1.99
JuvenJuvenile tuber1.72
Mother_GastroMother tuber of Gastrodia elata 0.30
Mother_JuvenMother tuber of Juvenile 0.45