Detail information of GWHGAAEX008079/evm.TU.scaffold_21.103


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|384151203|ref|YP_005534019.1|2.00E-08serine/threonine protein kinase [Amycolatopsis mediterranei S699]
KOGKOG11871.00E-65Serine/threonine protein kinase
nrgi|695001987|ref|XP_009419222.1|9.42E-84PREDICTED: probable receptor-like protein kinase At5g56460 [Musa acuminata subsp. malaccensis]
Swissprottr|Q9FM85|Y5564_ARATH4.00E-66Probable receptor-like protein kinase At5g56460
trEMBLtr|M0T953|M0T953_MUSAM4.00E-79Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr6P22050_001}
TAIRAT5G564601.00E-65Protein kinase superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000002229171922922338-
Transcript Sequence

Network for GWHGAAEX008079

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF07714.16Pkinase_Tyr41363.10E-22
Protein Sequence

Gene family

Gene familysubfamily
Protein Kinases FamilyRLK-Pelle_RLCK-VIIa-2

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006468Biological Processprotein phosphorylation
GO:0005524Molecular FunctionATP binding
GO:0004672Molecular Functionprotein kinase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms0.280
SRR2545915Juvenile tuber0.000
SRP108465SRR5643513five period of Gastrodia elata0.000
SRR5643514five period of Gastrodia elata0.000
SRR5643515five period of Gastrodia elata0.140
SRR5643524five period of Gastrodia elata0.120
SRR5643525five period of Gastrodia elata0.000
SRR5643528five period of Gastrodia elata0.460
SRR5643658five period of Gastrodia elata0.000
SRR5643659five period of Gastrodia elata0.120
SRR5643660five period of Gastrodia elata0.000
SRR5643661five period of Gastrodia elata0.140
SRR5643662five period of Gastrodia elata0.000
SRR5643663five period of Gastrodia elata0.000
SRR5643664five period of Gastrodia elata0.130
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_10.000
SRR6049655Rhizomagastrodiae_C368-T10_good_10.490
SRR6049656Rhizomagastrodiae_C368-T07_good_10.000
SRR6049657Rhizomagastrodiae_C368-T07_good_10.000
SRR6049658Rhizomagastrodiae_C368-T04_good_10.000
SRR6049659Rhizomagastrodiae_C368-T04_good_10.000
SRR6049660Rhizomagastrodiae_C368-T01_good_10.000
SRR6049661Rhizomagastrodiae_C368-T04_good_10.000
SRR6049662Rhizomagastrodiae_C368-T01_good_10.000
SRR6049663Rhizomagastrodiae_C368-T01_good_10.110
SRR6049664Rhizomagastrodiae_C368-T10_good_10.380
SRR6049665Rhizomagastrodiae_C368-T10_good_10.380
SRP279888GastroGastrodia elata tuber 0.09
JuvenJuvenile tuber0.09
Mother_GastroMother tuber of Gastrodia elata 0.59
Mother_JuvenMother tuber of Juvenile 0.22