Detail information of GWHGAAEX008086/evm.TU.scaffold_21.109


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG08591.00E-132Synaptobrevin/VAMP-like protein
nrgi|729445485|ref|XP_010522416.1|7.11E-143PREDICTED: vesicle-associated membrane protein 725 [Tarenaya hassleriana]
Swissprottr|Q9MAS5|VA726_ARATH3.00E-133Putative vesicle-associated membrane protein 726
trEMBLtr|M1BSH7|M1BSH7_SOLTU7.00E-142Uncharacterized protein {ECO:0000313|EnsemblPlants:PGSC0003DMT400051941}
TAIRAT1G047601.00E-132vesicle-associated membrane protein 726

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000002231026423120222+
Transcript Sequence

Network for GWHGAAEX008086

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF13774.5Longin321111.20E-22
PF00957.20Synaptobrevin1292156.70E-34
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName
GO:0016192Biological Processvesicle-mediated transport
GO:0016021Cellular Componentintegral component of membrane

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms102.620
SRR2545915Juvenile tuber92.080
SRP108465SRR5643513five period of Gastrodia elata61.460
SRR5643514five period of Gastrodia elata75.290
SRR5643515five period of Gastrodia elata74.720
SRR5643524five period of Gastrodia elata86.040
SRR5643525five period of Gastrodia elata135.360
SRR5643528five period of Gastrodia elata191.850
SRR5643658five period of Gastrodia elata134.010
SRR5643659five period of Gastrodia elata48.170
SRR5643660five period of Gastrodia elata50.750
SRR5643661five period of Gastrodia elata61.310
SRR5643662five period of Gastrodia elata59.970
SRR5643663five period of Gastrodia elata49.490
SRR5643664five period of Gastrodia elata51.550
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_155.500
SRR6049655Rhizomagastrodiae_C368-T10_good_156.800
SRR6049656Rhizomagastrodiae_C368-T07_good_167.770
SRR6049657Rhizomagastrodiae_C368-T07_good_151.330
SRR6049658Rhizomagastrodiae_C368-T04_good_186.340
SRR6049659Rhizomagastrodiae_C368-T04_good_181.430
SRR6049660Rhizomagastrodiae_C368-T01_good_166.360
SRR6049661Rhizomagastrodiae_C368-T04_good_174.740
SRR6049662Rhizomagastrodiae_C368-T01_good_181.370
SRR6049663Rhizomagastrodiae_C368-T01_good_189.460
SRR6049664Rhizomagastrodiae_C368-T10_good_197.340
SRR6049665Rhizomagastrodiae_C368-T10_good_197.340
SRP279888GastroGastrodia elata tuber 97.34
JuvenJuvenile tuber85.00
Mother_GastroMother tuber of Gastrodia elata 325.62
Mother_JuvenMother tuber of Juvenile 160.64