Gene detail

Detail information of GWHGAAEX008102/evm.TU.scaffold_21.128

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|438002128\|ref\|YP_007271871.1\|	6.00E-09	Phosphoesterase PA-phosphatase related protein [Tepidanaerobacter acetatoxydans Re1]
KOG	KOG2822	0	Sphingoid base-phosphate phosphatase
nr	gi\|743791153\|ref\|XP_010923351.1\|	0	PREDICTED: lipid phosphate phosphatase delta-like isoform X2 [Elaeis guineensis]
Swissprot	tr\|Q9M2G7\|LPPD_ARATH	0	Lipid phosphate phosphatase delta
trEMBL	tr\|M0S7D5\|M0S7D5_MUSAM	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr2P12440_001}
TAIR	AT3G58490	0	Phosphatidic acid phosphatase (PAP2) family protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000022	3566169	3569350	+

Transcript Sequence
>GWHTAAEX008102 CAGCGCGTTCTCCCAAGACACCCGCTTTCAACAATCATCGTTGCTTCTGATTACTTCGAGCCGATTTCAATTGTCTTATATAATGGTGAAAGCTTGATCCAGACTGTTAGAAATCTCATCACACCGGTCTCTTTGCTTTCGTTACGCCCAACAAAGCCTTCTATTTAGGGCTTTTGAGGCAAACCCTAGAAGCTCTTGGGAGAGATGCGCGAGATGGATGGCGGCATTGTTCCATTGTGGCAACCTCTTTGTCTCTCCGGCCTCCTCGGATTTGTTGTGATAGCTTCGTTTTTTGGTTTTACGAGAAAGTTTCGATCGATTGCGCAGCCATGGGTTGTTCGTCGAGTTCAATCCGACATTCCTCTCATACTTATGATCCAGAGATGGCATCACAAGCACTTTGATATATTCTTCTCTGCGCTCTCTTGTTTTGTCTCAGTTCCATTCTATACTGGGTTCCTCCCTCTTCTATACTGGAGTGGGCATAGCAAATTGGCGAGGCAGATGACTTTTCTAATAGCTTTTTGTGATTATATTGGGAATGCTGTTAAGGATGCAGTATCTGCCCCAAGGCCTAGTTGCCCCCCTGTTAGGAGAGTGACATATTCAGATGATGAAAAAGAAAATGCATTGGAGTATGGATTGCCTTCTTCACATGCTCTCAACACAGTTTGCCTTTCTGGATATTTGCTACACTATGTAATAACAACTTATGGTCATAAATTGGATGGTTTTTCCGTTTTGATAGGGTTCTCGTTAGTGTTCTTGTTGGTCTCTCTAGTTGGCATAGGGAGGGTATACTTAGGCATGCACAGTTTCATTGATGTTGTTGCTGGCATCACCATGGGGCTTGTTGTTCTTTTTTTCTGGTTGATGGTTCATGGGCATGTTGATGATTTCGTCACTGCTGGACAAAACGTTACATCTTTCTGGGCTGGCCTCTCCTTTGTATTGTTTTTTGCTTATCCTACACCAGAGTCTCCAACTCCAAGTTTTGACTATCACTGCTCTTTCAACGGTGTTGCTTTTGGAATAGTTAGCGGCGTCCAGCAAACCTATAATATGTTCCATTCTGAAGGCATTCCTCGTTTATTTAGCCCCGAGTTATCATTTCTCGTGTTCTTGGGAAGGATGTTGGCAGGCATCCCTACAATACTGATAGTGAAATTCTGCAGTAAAGCTCTTGCCAAGTGGATGCTTCCAGTGATCTGTAACACTTTGGGGATTCCAATTAGGTCATCCTGCTATGTTCCTGCGCTGAAAGATTCTGATGGCAGCAAAGCTAAGCCTGATAATAATAATAAGCAGAGTATTGGCTATCTTCAAAGAGCAGTTTCATTATTGCCTCACAAGACCTATGATGTGGATACTGGAATAATGTTTCTTCAATATGCAGGCCTGGCTTGGTCAGTGGTGGATTTGGTTCCTTACATTTTCACGCTCTTGAAGTTGCAGTAATTAATCATAATGCAATTTGTAAACAATTATGCAGCCTCAATTTAGTGTTCTTTTTATTTTTTAATACTTTTTGTTTATATATTAAAGTAAGAGAATTTGCATGTAATGATCTCTTTGTAATTTGCGTAAATTTTTCTATTAATTTTATATTTTACTACATGAATGGGGCTTGTTCAAGCTCCTTACTGGACTCTGCAGTCATCAAATGTATGCCTATTATTAAATAATAGCACAAAAGATTCAGCGATTTTGTTGCCGCAGT

Network for GWHGAAEX008102

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module4

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF01569.20	PAP2	100	223	3.00E-17

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	13.810
SRP064423	SRR2545915	Juvenile tuber	16.660
SRP108465	SRR5643513	five period of Gastrodia elata	28.380
	SRR5643514	five period of Gastrodia elata	53.060
	SRR5643515	five period of Gastrodia elata	65.340
	SRR5643524	five period of Gastrodia elata	55.400
	SRR5643525	five period of Gastrodia elata	15.990
	SRR5643528	five period of Gastrodia elata	17.880
	SRR5643658	five period of Gastrodia elata	13.490
	SRR5643659	five period of Gastrodia elata	22.730
	SRR5643660	five period of Gastrodia elata	12.120
	SRR5643661	five period of Gastrodia elata	19.980
	SRR5643662	five period of Gastrodia elata	16.090
	SRR5643663	five period of Gastrodia elata	18.140
	SRR5643664	five period of Gastrodia elata	17.590
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	28.190
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	34.660
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	29.780
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	20.680
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	15.480
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	13.850
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	25.900
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	16.910
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	28.590
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	29.480
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	41.860
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	41.860
SRP279888	Gastro	Gastrodia elata tuber	10.24
	Juven	Juvenile tuber	6.86
	Mother_Gastro	Mother tuber of Gastrodia elata	59.31
	Mother_Juven	Mother tuber of Juvenile	37.03