Detail information of GWHGAAEX008105/evm.TU.scaffold_21.131


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG16699.00E-120Predicted mRNA cap-binding protein related to eIF-4E
nrgi|225441601|ref|XP_002281697.1|8.67E-137PREDICTED: eukaryotic translation initiation factor NCBP [Vitis vinifera]
Swissprottr|A3RCV9|IF4E3_WHEAT3.00E-122Eukaryotic translation initiation factor NCBP
trEMBLtr|D7TI73|D7TI73_VITVI3.00E-137Putative uncharacterized protein {ECO:0000313|EMBL:CBI29949.3}
TAIRAT5G181109.00E-120novel cap-binding protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000002235871883603944-
Transcript Sequence

Network for GWHGAAEX008105

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01652.17IF4E642221.00E-54
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K03259EIF4E RNA transport map03013
HIF-1 signaling pathwaymap04066
PI3K-Akt signaling pathwaymap04151
mTOR signaling pathwaymap04150
Insulin signaling pathwaymap04910
Longevity regulating pathwaymap04211

Gene Ontology

GO term OntologyName
GO:0006413Biological Processtranslational initiation
GO:0003743Molecular Functiontranslation initiation factor activity
GO:0003723Molecular FunctionRNA binding
GO:0005737Cellular Componentcytoplasm

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms58.760
SRR2545915Juvenile tuber73.190
SRP108465SRR5643513five period of Gastrodia elata88.960
SRR5643514five period of Gastrodia elata110.020
SRR5643515five period of Gastrodia elata84.310
SRR5643524five period of Gastrodia elata112.670
SRR5643525five period of Gastrodia elata96.790
SRR5643528five period of Gastrodia elata95.240
SRR5643658five period of Gastrodia elata88.600
SRR5643659five period of Gastrodia elata76.020
SRR5643660five period of Gastrodia elata84.130
SRR5643661five period of Gastrodia elata84.840
SRR5643662five period of Gastrodia elata91.540
SRR5643663five period of Gastrodia elata90.050
SRR5643664five period of Gastrodia elata85.060
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_167.200
SRR6049655Rhizomagastrodiae_C368-T10_good_167.490
SRR6049656Rhizomagastrodiae_C368-T07_good_159.910
SRR6049657Rhizomagastrodiae_C368-T07_good_175.890
SRR6049658Rhizomagastrodiae_C368-T04_good_167.020
SRR6049659Rhizomagastrodiae_C368-T04_good_167.550
SRR6049660Rhizomagastrodiae_C368-T01_good_163.390
SRR6049661Rhizomagastrodiae_C368-T04_good_159.970
SRR6049662Rhizomagastrodiae_C368-T01_good_178.850
SRR6049663Rhizomagastrodiae_C368-T01_good_171.160
SRR6049664Rhizomagastrodiae_C368-T10_good_184.900
SRR6049665Rhizomagastrodiae_C368-T10_good_184.900
SRP279888GastroGastrodia elata tuber 74.79
JuvenJuvenile tuber111.83
Mother_GastroMother tuber of Gastrodia elata 85.55
Mother_JuvenMother tuber of Juvenile 122.46