Detail information of GWHGAAEX008118/evm.TU.scaffold_21.148


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|695055543|ref|XP_009415957.1|8.15E-94PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 isoform X2 [Musa acuminata subsp. malaccensis]
Swissprottr|Q689D6|RPD1_ARATH1.00E-16Protein ROOT PRIMORDIUM DEFECTIVE 1
trEMBLtr|M0TWN2|M0TWN2_MUSAM2.00E-94Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr9P01750_001}
TAIRAT5G629902.00E-74Ubiquitin carboxyl-terminal hydrolase family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000002240458054047523-
Transcript Sequence

Network for GWHGAAEX008118

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF11955.7PORR373581.20E-66
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms15.230
SRR2545915Juvenile tuber8.670
SRP108465SRR5643513five period of Gastrodia elata7.060
SRR5643514five period of Gastrodia elata5.380
SRR5643515five period of Gastrodia elata5.500
SRR5643524five period of Gastrodia elata5.750
SRR5643525five period of Gastrodia elata12.390
SRR5643528five period of Gastrodia elata8.590
SRR5643658five period of Gastrodia elata13.080
SRR5643659five period of Gastrodia elata11.410
SRR5643660five period of Gastrodia elata13.580
SRR5643661five period of Gastrodia elata11.250
SRR5643662five period of Gastrodia elata16.480
SRR5643663five period of Gastrodia elata12.250
SRR5643664five period of Gastrodia elata12.960
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_17.560
SRR6049655Rhizomagastrodiae_C368-T10_good_18.110
SRR6049656Rhizomagastrodiae_C368-T07_good_16.420
SRR6049657Rhizomagastrodiae_C368-T07_good_17.720
SRR6049658Rhizomagastrodiae_C368-T04_good_16.360
SRR6049659Rhizomagastrodiae_C368-T04_good_16.910
SRR6049660Rhizomagastrodiae_C368-T01_good_15.880
SRR6049661Rhizomagastrodiae_C368-T04_good_15.720
SRR6049662Rhizomagastrodiae_C368-T01_good_16.540
SRR6049663Rhizomagastrodiae_C368-T01_good_15.620
SRR6049664Rhizomagastrodiae_C368-T10_good_15.100
SRR6049665Rhizomagastrodiae_C368-T10_good_15.100
SRP279888GastroGastrodia elata tuber 16.31
JuvenJuvenile tuber12.46
Mother_GastroMother tuber of Gastrodia elata 9.83
Mother_JuvenMother tuber of Juvenile 16.97