Detail information of GWHGAAEX008120/evm.TU.scaffold_21.151
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| KOG | KOG0240 | 2.00E-175 | Kinesin (SMY1 subfamily) |
| nr | gi|743861887|ref|XP_010943401.1| | 0 | PREDICTED: armadillo repeat-containing kinesin-like protein 1 [Elaeis guineensis] |
| Swissprot | tr|Q0DV28|ARK1_ORYSJ | 0 | Armadillo repeat-containing kinesin-like protein 1 |
| trEMBL | tr|F6HND6|F6HND6_VITVI | 0 | Kinesin-like protein {ECO:0000256|RuleBase:RU000394} |
| TAIR | AT3G54870 | 2.00E-175 | Armadillo/beta-catenin repeat family protein / kinesin motor family protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000022 | 4101261 | 4156075 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX008120
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00225.22 | Kinesin | 47 | 384 | 8.40E-94 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0007018 | Biological Process | microtubule-based movement |
| GO:0008017 | Molecular Function | microtubule binding |
| GO:0003777 | Molecular Function | microtubule motor activity |
| GO:0005524 | Molecular Function | ATP binding |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 0.860 |
| SRR2545915 | Juvenile tuber | 0.870 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 1.130 |
| SRR5643514 | five period of Gastrodia elata | 1.500 | |
| SRR5643515 | five period of Gastrodia elata | 1.210 | |
| SRR5643524 | five period of Gastrodia elata | 1.530 | |
| SRR5643525 | five period of Gastrodia elata | 0.440 | |
| SRR5643528 | five period of Gastrodia elata | 0.340 | |
| SRR5643658 | five period of Gastrodia elata | 0.250 | |
| SRR5643659 | five period of Gastrodia elata | 0.650 | |
| SRR5643660 | five period of Gastrodia elata | 0.340 | |
| SRR5643661 | five period of Gastrodia elata | 0.380 | |
| SRR5643662 | five period of Gastrodia elata | 0.600 | |
| SRR5643663 | five period of Gastrodia elata | 0.310 | |
| SRR5643664 | five period of Gastrodia elata | 0.520 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 1.110 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 0.330 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 1.240 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 1.190 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 0.980 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 0.860 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 1.360 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 1.080 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 2.510 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 2.180 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 2.160 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 2.160 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 0.43 |
| Juven | Juvenile tuber | 0.64 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 0.70 | |
| Mother_Juven | Mother tuber of Juvenile | 0.49 |