Gene detail

Detail information of GWHGAAEX008122/evm.TU.scaffold_21.153

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|310821267\|ref\|YP_003953625.1\|	1.00E-16	hypothetical protein STAUR_4011 [Stigmatella aurantiaca DW4/3-1]
nr	gi\|743817426\|ref\|XP_010930930.1\|	0	PREDICTED: uncharacterized protein LOC105051966 [Elaeis guineensis]
trEMBL	tr\|B6TPV2\|B6TPV2_MAIZE	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GRMZM2G027336_P01}
TAIR	AT3G57620	2.00E-179	glyoxal oxidase-related protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000022	4189625	4191319	-

Transcript Sequence
>GWHTAAEX008122 ATGCCAGTCGCCAAGAAAGCTTCTTGCCTATATTCCCTCCTCTTCGCCTCCCTCGCTGCCTCAGCAGGCAATGCCTTGGATCACTGCGGCAATGTCGCCGCGGCAGCAGTTAACAGTCCCCAATTAGGGATCCTGATAATGTCGGGCGAATGGAAGATGGTGCATAAAAGCATCGGGATCTCAGCAATGCACGCGCAGCTCCTCCCCGGCTACAGACTCATCGTCTTCGATCGCACGGATTCCGGCCCTTCCAATCTCTCCCTTCCCAAAGACGCTCGCTGCCGTTCCCTCAAGCGCGACTGCACCGCCCATTCCGTCCTTCTCGACCTAGCCCTCTCCTCCTTTCGCCCCCTCGAGATCCTCTCCGACACCTGGTGCTCCTCCGGCTCGCTCCTCCCGAATGGATCCCTCCTCCAGACTGGCGGATTCAACGACGGCGACCGCTCTGTGCGCACCTTCGATTCCATGGCGTCTTCTTCATCATCCCCCGACTGGATCGAGCATCCCCTCTACCTCTCCTCCCGTCGATGGTACTCCTCGAACCAGATACTCCCTGACGGCCGCGTTATCATCGTCGGAGGCCGCCGTCAGTTCAACTACGAGTTCTTCCCCCGCGTTGGACTCCGATTCGTCGTACCCTTCCCCTTCTTGCTCGAAACACTAGACGGCCCAGCGGCAGAGAACAATCTCTACCCCTTCCTCCACCTCCTCCCCGACGGAACCCTCTTCGTGTTCGCCAACACCCGCGCCGTCCTCCTCGACTTCGAATCCCACCGCGTTGTCCGCAACCTTCCGGCCATTCCCGACGGAATCCCACGCAACTACCCCAGCAGCGGATCCTCCGTTCTCCTCCGCCTTGCCCTTCCATCTCCCTTTCCCGAAATCCTCATCTGCGGAGGCGCTCAACGGGGCTCCTTCCAAAGCGCACTCAACGGGACCTTCGTCCCGGCCGCGCGAACGTGCGGCAGGATCGCCCCAGCCGACCCGAACCCCATCTGGGCCATGGAGACGATGCCGGTGCCAAGGGTTATGGGGGACATGGTGCTGCTTCCCACCGGCGACGTGCTCATCATCAATGGTGCAGCCGCCGGGACGGCCGGGTGGGAGCTAGGGCGGGACCCGGTGCTGAACCCGGTTCTTTACCGGCCCGGCATGCCTCGAGGATCCCGCTTCGTCGTCCTCAGCGGCTCCCCGATTCCGCGGCTCTACCACTCCATTGCTGTGCTCGATCTGCTCGGTAGGGTTTTGGTCGGAGGGAGCAATCCGCACGTCCGGTACAGATTCTGGAACGCGACACACCCGACGGAGCTCAGCGTCGAGGCGTTCCTCCCGCCGTACATGGATGAGAGGCTGTCTGGGCTGCGGCCGAGGATCATCGGAGCGGAGGCCGAGCTTGTTTACGGGAAGAGCGCGGGGGTTCGGTTCGTCGTGGGGTATTTATATGCGGAGCCGCGGGTCGAGGTGGTGATGGTCGCGCCGGGATTCGTGACGCATTCGCTGGGGATGAATCAGAGAGCGGTGGTGCTGCCGATGGAGAGGCTCGCGCCGGCGGGTTTTTTCACATTTGATGCCGAAGTGATGGCGCCGAATTCGCCGGATATTGCGCCGCCTGGGTATTATATGCTGTTTGTCGTGCACGCCGGCGTGCCGGGAGAGGGTGTTTGGGTCAGGATTTCTGCTGCTGCGACCCGGTGA

Network for GWHGAAEX008122

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF07250.10	Glyoxal_oxid_N	63	300	2.60E-90
PF09118.10	DUF1929	455	558	3.20E-26

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	0.050
SRP064423	SRR2545915	Juvenile tuber	0.210
SRP108465	SRR5643513	five period of Gastrodia elata	0.240
	SRR5643514	five period of Gastrodia elata	0.320
	SRR5643515	five period of Gastrodia elata	0.180
	SRR5643524	five period of Gastrodia elata	0.430
	SRR5643525	five period of Gastrodia elata	0.180
	SRR5643528	five period of Gastrodia elata	0.000
	SRR5643658	five period of Gastrodia elata	0.070
	SRR5643659	five period of Gastrodia elata	0.120
	SRR5643660	five period of Gastrodia elata	0.040
	SRR5643661	five period of Gastrodia elata	0.040
	SRR5643662	five period of Gastrodia elata	0.040
	SRR5643663	five period of Gastrodia elata	0.000
	SRR5643664	five period of Gastrodia elata	0.120
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	0.200
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	0.520
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	0.400
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	0.580
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	0.200
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	0.050
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	0.140
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	0.850
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	0.640
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	0.530
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	0.100
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	0.100
SRP279888	Gastro	Gastrodia elata tuber	0.12
	Juven	Juvenile tuber	0.09
	Mother_Gastro	Mother tuber of Gastrodia elata	1.23
	Mother_Juven	Mother tuber of Juvenile	0.83