Detail information of GWHGAAEX008127/evm.TU.scaffold_21.159


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG22970Predicted translation factor, contains W2 domain
nrgi|672128488|ref|XP_008787734.1|0PREDICTED: basic leucine zipper and W2 domain-containing protein 2-like [Phoenix dactylifera]
Swissprottr|P48724|IF5_PHAVU1.00E-06Eukaryotic translation initiation factor 5
trEMBLtr|B3TM17|B3TM17_ELAGV0Translation initiation factor {ECO:0000313|EMBL:ACF06598.1}
TAIRAT5G362300ARM repeat superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000002245480324564027+
Transcript Sequence

Network for GWHGAAEX008127

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02020.17W23384111.30E-19
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0005515Molecular Functionprotein binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms137.490
SRR2545915Juvenile tuber152.340
SRP108465SRR5643513five period of Gastrodia elata209.620
SRR5643514five period of Gastrodia elata234.670
SRR5643515five period of Gastrodia elata229.180
SRR5643524five period of Gastrodia elata242.420
SRR5643525five period of Gastrodia elata338.390
SRR5643528five period of Gastrodia elata380.400
SRR5643658five period of Gastrodia elata371.580
SRR5643659five period of Gastrodia elata191.550
SRR5643660five period of Gastrodia elata175.190
SRR5643661five period of Gastrodia elata179.140
SRR5643662five period of Gastrodia elata174.350
SRR5643663five period of Gastrodia elata194.540
SRR5643664five period of Gastrodia elata150.050
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1179.350
SRR6049655Rhizomagastrodiae_C368-T10_good_1222.780
SRR6049656Rhizomagastrodiae_C368-T07_good_1199.120
SRR6049657Rhizomagastrodiae_C368-T07_good_1160.300
SRR6049658Rhizomagastrodiae_C368-T04_good_1160.240
SRR6049659Rhizomagastrodiae_C368-T04_good_1164.290
SRR6049660Rhizomagastrodiae_C368-T01_good_1167.640
SRR6049661Rhizomagastrodiae_C368-T04_good_1170.130
SRR6049662Rhizomagastrodiae_C368-T01_good_1238.450
SRR6049663Rhizomagastrodiae_C368-T01_good_1207.320
SRR6049664Rhizomagastrodiae_C368-T10_good_1276.480
SRR6049665Rhizomagastrodiae_C368-T10_good_1276.480
SRP279888GastroGastrodia elata tuber 238.57
JuvenJuvenile tuber271.93
Mother_GastroMother tuber of Gastrodia elata 267.87
Mother_JuvenMother tuber of Juvenile 281.75