Detail information of GWHGAAEX008132/evm.TU.scaffold_21.166


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|17230693|ref|NP_487241.1|4.00E-89Mg-protoporphyrin IX methyl transferase [Nostoc sp. PCC 7120]
KOGKOG12703.00E-108Methyltransferases
nrgi|731369094|ref|XP_010696441.1|2.53E-117PREDICTED: magnesium protoporphyrin IX methyltransferase, chloroplastic [Beta vulgaris subsp. vulgaris]
Swissprottr|Q9SW18|CHLM_ARATH8.00E-109Magnesium protoporphyrin IX methyltransferase, chloroplastic (Precursor)
trEMBLtr|A0A067EBM6|A0A067EBM6_CITSI2.00E-115Uncharacterized protein {ECO:0000313|EMBL:KDO51265.1}
TAIRAT4G250803.00E-108magnesium-protoporphyrin IX methyltransferase

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000002246818804683257+
Transcript Sequence

Network for GWHGAAEX008132

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module11

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF07109.10Mg-por_mtran_C2263219.60E-33
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K03428bchM, chlM Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Porphyrin and chlorophyll metabolismmap00860

Gene Ontology

GO term OntologyName
GO:0015995Biological Processchlorophyll biosynthetic process
GO:0046406Molecular Functionmagnesium protoporphyrin IX methyltransferase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms6.700
SRR2545915Juvenile tuber5.500
SRP108465SRR5643513five period of Gastrodia elata9.630
SRR5643514five period of Gastrodia elata8.700
SRR5643515five period of Gastrodia elata9.430
SRR5643524five period of Gastrodia elata9.540
SRR5643525five period of Gastrodia elata39.610
SRR5643528five period of Gastrodia elata33.710
SRR5643658five period of Gastrodia elata37.590
SRR5643659five period of Gastrodia elata16.050
SRR5643660five period of Gastrodia elata20.400
SRR5643661five period of Gastrodia elata17.580
SRR5643662five period of Gastrodia elata31.290
SRR5643663five period of Gastrodia elata30.390
SRR5643664five period of Gastrodia elata32.760
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_19.130
SRR6049655Rhizomagastrodiae_C368-T10_good_17.430
SRR6049656Rhizomagastrodiae_C368-T07_good_110.030
SRR6049657Rhizomagastrodiae_C368-T07_good_19.920
SRR6049658Rhizomagastrodiae_C368-T04_good_115.310
SRR6049659Rhizomagastrodiae_C368-T04_good_115.770
SRR6049660Rhizomagastrodiae_C368-T01_good_19.250
SRR6049661Rhizomagastrodiae_C368-T04_good_110.280
SRR6049662Rhizomagastrodiae_C368-T01_good_111.310
SRR6049663Rhizomagastrodiae_C368-T01_good_16.140
SRR6049664Rhizomagastrodiae_C368-T10_good_19.330
SRR6049665Rhizomagastrodiae_C368-T10_good_19.330
SRP279888GastroGastrodia elata tuber 45.64
JuvenJuvenile tuber7.90
Mother_GastroMother tuber of Gastrodia elata 15.84
Mother_JuvenMother tuber of Juvenile 9.65