Detail information of GWHGAAEX008133/evm.TU.scaffold_21.167
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|158313088|ref|YP_001505596.1| | 8.00E-06 | hypothetical protein Franean1_1236 [Frankia sp. EAN1pec] |
| KOG | KOG2161 | 0 | Glucosidase I |
| nr | gi|672130655|ref|XP_008788865.1| | 0 | PREDICTED: mannosyl-oligosaccharide glucosidase GCS1-like [Phoenix dactylifera] |
| Swissprot | tr|F4HTM3|GCS1_ARATH | 0 | Mannosyl-oligosaccharide glucosidase GCS1 |
| trEMBL | tr|I1NUR8|I1NUR8_ORYGL | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:ORGLA01G0360800.1} |
| TAIR | AT1G67490 | 0 | glucosidase 1 |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000022 | 4703075 | 4800848 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX008133
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF16923.4 | Glyco_hydro_63N | 114 | 279 | 5.90E-40 |
| PF03200.15 | Glyco_hydro_63 | 357 | 854 | 9.40E-215 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Carbohydrate-Active enzymes Family | GH63 |
| Carbohydrate-Active enzymes Family | GH63 |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K01228 | MOGS | Metabolic pathways | map01100 |
| N-Glycan biosynthesis | map00510 | ||
| Protein processing in endoplasmic reticulum | map04141 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0003824 | Molecular Function | catalytic activity |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 66.860 |
| SRR2545915 | Juvenile tuber | 62.170 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 32.400 |
| SRR5643514 | five period of Gastrodia elata | 35.470 | |
| SRR5643515 | five period of Gastrodia elata | 31.670 | |
| SRR5643524 | five period of Gastrodia elata | 33.240 | |
| SRR5643525 | five period of Gastrodia elata | 25.570 | |
| SRR5643528 | five period of Gastrodia elata | 18.280 | |
| SRR5643658 | five period of Gastrodia elata | 21.330 | |
| SRR5643659 | five period of Gastrodia elata | 26.430 | |
| SRR5643660 | five period of Gastrodia elata | 32.630 | |
| SRR5643661 | five period of Gastrodia elata | 26.770 | |
| SRR5643662 | five period of Gastrodia elata | 26.830 | |
| SRR5643663 | five period of Gastrodia elata | 32.810 | |
| SRR5643664 | five period of Gastrodia elata | 33.140 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 31.640 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 30.040 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 27.460 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 30.160 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 21.940 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 24.750 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 24.250 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 22.450 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 22.990 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 18.240 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 29.160 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 29.160 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 35.15 |
| Juven | Juvenile tuber | 38.68 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 29.85 | |
| Mother_Juven | Mother tuber of Juvenile | 37.68 |