Detail information of GWHGAAEX008150/evm.TU.scaffold_21.195


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|218779469|ref|YP_002430787.1|8.00E-06peptidase S10 serine carboxypeptidase [Desulfatibacillum alkenivorans AK-01]
KOGKOG12823.00E-22Serine carboxypeptidases (lysosomal cathepsin A)
nrgi|672133377|ref|XP_008790305.1|6.47E-28PREDICTED: serine carboxypeptidase-like 18 [Phoenix dactylifera]
Swissprottr|Q9C7Z9|SCP18_ARATH8.00E-23Serine carboxypeptidase-like 18 (Precursor)
trEMBLtr|Q6ZH05|Q6ZH05_ORYSJ7.00E-25cDNA clone:J013000E09, full insert sequence {ECO:0000313|EMBL:BAG89219.1}
TAIRAT1G335403.00E-22serine carboxypeptidase-like 18

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000002254819025484683-
Transcript Sequence

Network for GWHGAAEX008150

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00450.21Peptidase_S10151041.60E-26
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006508Biological Processproteolysis
GO:0004185Molecular Functionserine-type carboxypeptidase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms16.020
SRR2545915Juvenile tuber13.350
SRP108465SRR5643513five period of Gastrodia elata4.000
SRR5643514five period of Gastrodia elata8.410
SRR5643515five period of Gastrodia elata8.600
SRR5643524five period of Gastrodia elata4.120
SRR5643525five period of Gastrodia elata10.570
SRR5643528five period of Gastrodia elata5.550
SRR5643658five period of Gastrodia elata8.450
SRR5643659five period of Gastrodia elata4.680
SRR5643660five period of Gastrodia elata10.090
SRR5643661five period of Gastrodia elata5.870
SRR5643662five period of Gastrodia elata6.920
SRR5643663five period of Gastrodia elata13.470
SRR5643664five period of Gastrodia elata7.180
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_130.690
SRR6049655Rhizomagastrodiae_C368-T10_good_128.960
SRR6049656Rhizomagastrodiae_C368-T07_good_116.220
SRR6049657Rhizomagastrodiae_C368-T07_good_138.640
SRR6049658Rhizomagastrodiae_C368-T04_good_148.360
SRR6049659Rhizomagastrodiae_C368-T04_good_132.500
SRR6049660Rhizomagastrodiae_C368-T01_good_123.090
SRR6049661Rhizomagastrodiae_C368-T04_good_146.340
SRR6049662Rhizomagastrodiae_C368-T01_good_119.440
SRR6049663Rhizomagastrodiae_C368-T01_good_124.710
SRR6049664Rhizomagastrodiae_C368-T10_good_112.120
SRR6049665Rhizomagastrodiae_C368-T10_good_112.120
SRP279888GastroGastrodia elata tuber 28.24
JuvenJuvenile tuber23.68
Mother_GastroMother tuber of Gastrodia elata 113.51
Mother_JuvenMother tuber of Juvenile 43.10