Detail information of GWHGAAEX008153/evm.TU.scaffold_21.198


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|218779469|ref|YP_002430787.1|2.00E-34peptidase S10 serine carboxypeptidase [Desulfatibacillum alkenivorans AK-01]
KOGKOG12827.00E-132Serine carboxypeptidases (lysosomal cathepsin A)
nrgi|743847104|ref|XP_010939016.1|4.16E-165PREDICTED: serine carboxypeptidase-like 18 isoform X1 [Elaeis guineensis]
Swissprottr|Q9CAU3|SCP2_ARATH2.00E-132Serine carboxypeptidase-like 2 (Precursor)
trEMBLtr|M0SK50|M0SK50_MUSAM6.00E-155Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr4P01330_001}
TAIRAT1G733007.00E-132serine carboxypeptidase-like 2

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000002255877555593151+
Transcript Sequence

Network for GWHGAAEX008153

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module6

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00450.21Peptidase_S10294602.60E-113
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006508Biological Processproteolysis
GO:0004185Molecular Functionserine-type carboxypeptidase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms139.560
SRR2545915Juvenile tuber166.150
SRP108465SRR5643513five period of Gastrodia elata904.430
SRR5643514five period of Gastrodia elata397.600
SRR5643515five period of Gastrodia elata997.380
SRR5643524five period of Gastrodia elata801.220
SRR5643525five period of Gastrodia elata396.600
SRR5643528five period of Gastrodia elata634.040
SRR5643658five period of Gastrodia elata796.520
SRR5643659five period of Gastrodia elata445.980
SRR5643660five period of Gastrodia elata330.590
SRR5643661five period of Gastrodia elata430.270
SRR5643662five period of Gastrodia elata430.730
SRR5643663five period of Gastrodia elata653.800
SRR5643664five period of Gastrodia elata158.990
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1116.780
SRR6049655Rhizomagastrodiae_C368-T10_good_1255.680
SRR6049656Rhizomagastrodiae_C368-T07_good_1122.440
SRR6049657Rhizomagastrodiae_C368-T07_good_1100.020
SRR6049658Rhizomagastrodiae_C368-T04_good_140.850
SRR6049659Rhizomagastrodiae_C368-T04_good_129.800
SRR6049660Rhizomagastrodiae_C368-T01_good_176.140
SRR6049661Rhizomagastrodiae_C368-T04_good_163.260
SRR6049662Rhizomagastrodiae_C368-T01_good_1414.270
SRR6049663Rhizomagastrodiae_C368-T01_good_1133.010
SRR6049664Rhizomagastrodiae_C368-T10_good_1312.510
SRR6049665Rhizomagastrodiae_C368-T10_good_1312.510
SRP279888GastroGastrodia elata tuber 245.37
JuvenJuvenile tuber165.57
Mother_GastroMother tuber of Gastrodia elata 328.01
Mother_JuvenMother tuber of Juvenile 302.54