Detail information of GWHGAAEX008155/evm.TU.scaffold_21.200


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743848418|ref|XP_010939354.1|9.67E-71PREDICTED: transcription factor bHLH74-like isoform X4 [Elaeis guineensis]
Swissprottr|Q6NKN9|BH074_ARATH2.00E-49Transcription factor bHLH74
trEMBLtr|K4BUI5|K4BUI5_SOLLC2.00E-55Uncharacterized protein {ECO:0000313|EnsemblPlants:Solyc04g077480.2.1}
TAIRAT1G101204.00E-49basic helix-loop-helix (bHLH) DNA-binding superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000002256141815616955+
Transcript Sequence

Network for GWHGAAEX008155

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module1

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00010.25HLH1722201.50E-07
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilybHLH

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0046983Molecular Functionprotein dimerization activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms0.640
SRR2545915Juvenile tuber1.620
SRP108465SRR5643513five period of Gastrodia elata0.830
SRR5643514five period of Gastrodia elata1.940
SRR5643515five period of Gastrodia elata2.210
SRR5643524five period of Gastrodia elata2.150
SRR5643525five period of Gastrodia elata5.720
SRR5643528five period of Gastrodia elata3.960
SRR5643658five period of Gastrodia elata5.410
SRR5643659five period of Gastrodia elata0.450
SRR5643660five period of Gastrodia elata0.930
SRR5643661five period of Gastrodia elata1.350
SRR5643662five period of Gastrodia elata1.130
SRR5643663five period of Gastrodia elata1.200
SRR5643664five period of Gastrodia elata1.140
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_11.000
SRR6049655Rhizomagastrodiae_C368-T10_good_11.480
SRR6049656Rhizomagastrodiae_C368-T07_good_10.670
SRR6049657Rhizomagastrodiae_C368-T07_good_10.760
SRR6049658Rhizomagastrodiae_C368-T04_good_10.560
SRR6049659Rhizomagastrodiae_C368-T04_good_10.220
SRR6049660Rhizomagastrodiae_C368-T01_good_10.400
SRR6049661Rhizomagastrodiae_C368-T04_good_10.450
SRR6049662Rhizomagastrodiae_C368-T01_good_10.670
SRR6049663Rhizomagastrodiae_C368-T01_good_10.700
SRR6049664Rhizomagastrodiae_C368-T10_good_11.940
SRR6049665Rhizomagastrodiae_C368-T10_good_11.940
SRP279888GastroGastrodia elata tuber 0.92
JuvenJuvenile tuber0.76
Mother_GastroMother tuber of Gastrodia elata 1.08
Mother_JuvenMother tuber of Juvenile 0.97