Detail information of GWHGAAEX008157/evm.TU.scaffold_21.202


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|672124663|ref|XP_008785725.1|7.84E-106PREDICTED: uncharacterized protein LOC103704275 [Phoenix dactylifera]
trEMBLtr|M0S3F9|M0S3F9_MUSAM1.00E-101Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr1P27020_001}
TAIRAT3G122101.00E-76DNA binding

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000002256261535647739-
Transcript Sequence

Network for GWHGAAEX008157

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module2

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName
GO:0006281Biological ProcessDNA repair
GO:0003824Molecular Functioncatalytic activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms4.030
SRR2545915Juvenile tuber7.460
SRP108465SRR5643513five period of Gastrodia elata13.170
SRR5643514five period of Gastrodia elata11.140
SRR5643515five period of Gastrodia elata12.580
SRR5643524five period of Gastrodia elata9.570
SRR5643525five period of Gastrodia elata2.440
SRR5643528five period of Gastrodia elata4.710
SRR5643658five period of Gastrodia elata3.120
SRR5643659five period of Gastrodia elata5.950
SRR5643660five period of Gastrodia elata6.800
SRR5643661five period of Gastrodia elata7.310
SRR5643662five period of Gastrodia elata5.550
SRR5643663five period of Gastrodia elata4.450
SRR5643664five period of Gastrodia elata5.400
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_110.560
SRR6049655Rhizomagastrodiae_C368-T10_good_113.630
SRR6049656Rhizomagastrodiae_C368-T07_good_113.030
SRR6049657Rhizomagastrodiae_C368-T07_good_19.200
SRR6049658Rhizomagastrodiae_C368-T04_good_19.490
SRR6049659Rhizomagastrodiae_C368-T04_good_17.980
SRR6049660Rhizomagastrodiae_C368-T01_good_110.240
SRR6049661Rhizomagastrodiae_C368-T04_good_17.590
SRR6049662Rhizomagastrodiae_C368-T01_good_116.620
SRR6049663Rhizomagastrodiae_C368-T01_good_113.370
SRR6049664Rhizomagastrodiae_C368-T10_good_126.660
SRR6049665Rhizomagastrodiae_C368-T10_good_126.660
SRP279888GastroGastrodia elata tuber 5.30
JuvenJuvenile tuber5.84
Mother_GastroMother tuber of Gastrodia elata 7.53
Mother_JuvenMother tuber of Juvenile 4.82