Detail information of GWHGAAEX008164/evm.TU.scaffold_21.214


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|262193487|ref|YP_003264696.1|2.00E-31MATE efflux family protein [Haliangium ochraceum DSM 14365]
KOGKOG13470Uncharacterized membrane protein, predicted efflux pump
nrgi|672206855|ref|XP_008779545.1|0PREDICTED: MATE efflux family protein 5-like [Phoenix dactylifera]
Swissprottr|Q9SIA4|MATE5_ARATH1.00E-55MATE efflux family protein 5
trEMBLtr|M0T9U6|M0T9U6_MUSAM0MATE efflux family protein {ECO:0000256|RuleBase:RU004914}
TAIRAT1G583400MATE efflux family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000002260205516023309+
Transcript Sequence

Network for GWHGAAEX008164

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module2

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01554.17MatE321921.70E-33
PF01554.17MatE2544161.40E-30
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0055085Biological Processtransmembrane transport
GO:0042910Molecular Functionxenobiotic transporter activity
GO:0015297Molecular Functionantiporter activity
GO:0016020Cellular Componentmembrane

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms3.010
SRR2545915Juvenile tuber5.520
SRP108465SRR5643513five period of Gastrodia elata23.100
SRR5643514five period of Gastrodia elata5.200
SRR5643515five period of Gastrodia elata8.550
SRR5643524five period of Gastrodia elata5.990
SRR5643525five period of Gastrodia elata1.250
SRR5643528five period of Gastrodia elata1.190
SRR5643658five period of Gastrodia elata2.910
SRR5643659five period of Gastrodia elata2.130
SRR5643660five period of Gastrodia elata3.810
SRR5643661five period of Gastrodia elata3.400
SRR5643662five period of Gastrodia elata0.330
SRR5643663five period of Gastrodia elata0.920
SRR5643664five period of Gastrodia elata0.540
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_19.810
SRR6049655Rhizomagastrodiae_C368-T10_good_120.190
SRR6049656Rhizomagastrodiae_C368-T07_good_114.120
SRR6049657Rhizomagastrodiae_C368-T07_good_114.150
SRR6049658Rhizomagastrodiae_C368-T04_good_110.050
SRR6049659Rhizomagastrodiae_C368-T04_good_17.430
SRR6049660Rhizomagastrodiae_C368-T01_good_111.480
SRR6049661Rhizomagastrodiae_C368-T04_good_116.330
SRR6049662Rhizomagastrodiae_C368-T01_good_115.330
SRR6049663Rhizomagastrodiae_C368-T01_good_19.230
SRR6049664Rhizomagastrodiae_C368-T10_good_116.180
SRR6049665Rhizomagastrodiae_C368-T10_good_116.180
SRP279888GastroGastrodia elata tuber 0.94
JuvenJuvenile tuber4.05
Mother_GastroMother tuber of Gastrodia elata 5.37
Mother_JuvenMother tuber of Juvenile 4.77