Gene detail

Detail information of GWHGAAEX008168/evm.TU.scaffold_21.222

Functional Annotation

Database	Orthologs	E value	Annotation

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000022	6213316	6218866	+

Transcript Sequence
>GWHTAAEX008168 AGTAAAAATCCTTTCTAAGTTCCTATTTTTTCAATAAAACCTCAAATTAGGTCCTCCAACAGTACAAGCTCTCAACGAACGAACATTAACCTCCAGCATCATATTGAAGATCGACGTTCGAGCTCTTTTGATGAGAAGAAGATTGAGCAGTACGAGCTCATGACGGGCGTCGACCTCCAGTGTCGGGAAGAATATATAACATTTGAGCGACGACGTCAATCCCTAACATCATGTTAAAAATCAATTAATTTGAACTCTTGAAGGGATTGATGTTCCATCTCCAACATTTTTGGAAAGCACCAATTTGATATTTCTTTGCAAGCAAATTGTATCTGTTTGCAGATTGTCAATCATTCATATACATCATTCTCTAATTGCTATTTTAATTTTTGAAAATCTAATAAAATTATAAATTGAGGTGTTGAATCAAATACAACATATTTCTTTTTTGAAATTAGTGAGGGCATAGCCCAATATGCTGATCAAATCAATTATAGTACAATAATATAAATCAACATATGAGTCAAATAAACAAAAGAACTTCACAAAGCTAAGAAAACAAAATAGAATGGAAAAATAAATTGAGATTATGGATTCAAAACTTCAGATGAAATTACGCGGGACCTGTGATTCTTAGAGTTTTTTTCCCCATAATATTTGTGTGAAGTATCTGTCATTTGAATAAGACCAAGAGTGAAAATAGTCCAAACCAAAGGATGAGGCTCATGATTCATTCTAATCCGTCCTTGTCCTAGGCCAAAATGAAAGCATAATGCAAAATTTACGATCAAGAAAAACCAACAAAAGTTCATCCAAATTAGACAAAAAGTTACAAAAGCATATGCAAAGAAAGAGGCCCAAATGAAAAAGTAATAGCATCTAAAAAAGTTAGCCTCCAATATAACATAAATATGCATGTGTTGCACAACCTAGTTCAAGACAAAATTTCCCGAAATCATATGTAAATTACTCCCAGAAGTCTCATAATATAAGTCGAAGAAATTTGAAATAAGAAGCAAACTATATAAAAGCAGAATCTGCAACCTTTTAAGGCCCGATTAAACCCCAACCAATAAAGAATAACCATTCAATCAAGTAAAAGTAGTAAGCTCAAATGAAATTAAAATCAAATCTAATATAGGCAGCCTCCAAAATATAGTATTTAAACCACAACTGCACATACACCTCCCAAACTTTACTATCTATTCTCCAATTCGCATCTTCTATATTCTCACGTAGCCCATATTTAAGCTAGAAAAAATTTAGACATAAAGAACATCCTAAATAAGAATCTATTGCAGCATATAAAGACACCAGATCTAACAAAACAGATGCATGTTTCGTGAGGCGAATGAGGCCCAAAGGAAGAAGGAGAAATAATAGCACATTCATTTTCCAGCAACGAGTTTTAAGTCCAGAGTGTATTGCCGAGGGGAAGAGGAAGGCCCATTAATGCTTGAAGGCAAATTAATTGGAGAATTAGAAATTAAAGGAATTTTCATATTTTCAACATCAAAAGAAGACCCTTTTCCATTGGGCATTTGCATCTATAATATTAGGAGATACTTTCATAATCGAGGATAAATGTTCAGAAGATCTATTTCTAATTATAGTTGCACTCCCAATGTTCTTAATAATAGCTAGCGAGGTCTTCTAGAGCTACATCTTCCACGAATGATAGGTTCATCTGCCTTTGCAAGAAGAACAAAATTTAGGGATCAATAATACTTTACCTATTGAGAAATCAATTTTCCTTTAGTAAGAACTTGTAAAACGTGTAGTAAAACTTGAGCAATAAAATAATTTAAACATCTTCTTCGCAATAAAACTTGAGCAATAAAATCATTCAAAAATCTTCTTCACAATAAAACTTAATCAATTAACAGTTATCAAACAGTGAAAACAAGAATAATGAACCTTTTAATTTCGATACCTTATTCATAGCTTCTAAGAAAATTTTGTACATGCATTTTTTGCCAAGACCAATACCTACTATGCAGTTAATCTTTTTCGTTCGCCCTATAATAACTCTTCATCAATGATAGAATTAATATCAGAAGTAGGCGGAATGTAAGAAAAAGTTATCCATTTACTTTCGTTTGAACCAAGGAAAAAGAGGATTTACATGACGTACCAGAGCTTAGAGAAAAACCTAGTCTAGAAGGAGATAAAGGAGGACTCAACAAACATGGATGAGACGTGGCAGTCGAGAGCGTCGGCGACCTAATGGGAGCGCCGCTGAGAGGTCGCCGACGCTGGAACCTTGAAATCCCTAAGCGCAGGAGACAAGAGTCGGAAACCCTCGAGCGCCGATTTTTTGATACTCAAACTTCTCGCATTTTAGAATTAAAATGGAATTTTTAAAAATGATAGGTACTTATTAGAAAAAAGTAAAACTATGAATGTTTAGGCCGAGTAATAAAGAGATGACTCTGAATCTGAATGATCTTATAGCTAGCCAGGTGATTTACACTCTTAATTTGTTATCCAATATTATTAATTCAGATTTTTTTATTCGAGTCAAAAACAAGTGAGGCCTCAATCTTCGAAATCATTCGGAGCAGGAACAATCTCGTTTAAGCTTCTCCGGTGAGAGGGCGAAGGCTCCCCGCCGCTTGCTCGAGATCTCCACGCATCCGTCGGCGACAAATGATCGCCGCTCCTGGGCAGCGAAGGATGCCGCCAGCTCCCAAAGAACGCCGCCCTCCATCTTCTTCTTGATGAGAATGAGCCTCTTAATCCCTCTGAGGCCGAAGCGTTGTTGTCCTCTCGGACCACTCTCAAGGGATTCTGGAGCGCTTCCCGAACATCTTTGGCAAGCGGCCGATTCGCCGGCTTTGGATTAAGGCAGGATCTGGCTACGATCGACACCGCCCACACCTCCTCCAAGAGGTCGTCGTAGCCGATGAGCGACGGATCCATTATTTTCGAGATCGGACCTCTGTCCTTGATGTCGATGTGCCCTAACGTGTGTTCAAGCCACTCCGTCGCCGATTCGCTCTTCGATGCGCTGATGCCGAGTTTGCCTGTGATGAGCTCAATCAGAACCTTCCCAAAGCAGTACACATCGTAAGCGCACGACGCCGGCCCCAAATCTGTCAATCGCAAATCATCAGGCTATGACACACGCAACCCGGCAATTCAATTTGGTGAGATTTCATACAGAAAGTTAATACCAGAGGCTCTTCTCTCGAATCTCCTGCATATCAATTACAAATATCTTTTGAGGAGAACGTTCATTCGAAATGATATGCATAATTGAATTTTAGCTGGAAGGGGAACTTACTGCCGCAGACTTAAGTAACTCGACAGGACTGTTTTGTACCCTTCCCGTTTTTGAGGGCATACATTGCTCAAGCTTCCAAGCCGCACCTCGAAGTTGTCATCGAGAAGGATGCTGCTTGCTTGTACATCTCTGCACCCCATAGAATATGACTCAAGACTTTGCGGAAATGAATGAATCAAAGAAGATTGATGTGGCACTTATATTTGCTGTTTTTGGGCTGGAATTTCATCGAAGAACATAAATATTATGTTTTTGTGTTTACTTGTATGATATGTGATTGTGTTTGCATCTTAATAAGAACCTGGGAACCTTTTCCGAAATGAAAAATTACCTGTGAACAAGCGGAGGAGTGAACTCGTGATGCAGGTAGCAAAGAGCTTCAGCCACGCCAGTTGCAATCTTGAGCCTTGTTATCCAATCCAACGGTTGGAATCCATCCTCTTCCATTCCGTAAAGGCCATAGCACAAGTCGCGATTATTCATTAGTTTGTAGACAAGAAACTTCTCATTCTCTCTCTGCAGGCAATGTCCGAGAAGGCCGACCAATCTCTCGTGTGGAGATCTCCTGAGCAAATCCAACTCAACCGAATAAGCCTTGTGTGCCGCATAGACCATATCTATCCTCTTCACCACCACCCGACTCAGGTCTTCCAAAACTCCGTGGAAGAGATCACCCGAATGCCCGTGCTTTATCAGATTATCGTCGCTGAAATTCGATGTTGCGATGACCAATTGTTCGTATGTGAAGCCATCTTTAGTAGCAGGCAGGGGGGAATTGGCGACCAAACTCACATTGCTCTCTTGTTCAGCTGAATGAGCTCTTCTGCGTCTCATCAGACACACCACAATTAAAATTACTAGGAATACAATGATAGCGGCACCAAAAATAGTTCCTATCAAAATATAGATCCGAGATTTCTTCTTGCTCTTGTCAGACGAATTGAAGTTGGGAGTCGGAGCAGGAGGTGCGGTCAAATTCACCACTCCGTCATAATGTATCCCCCTCTCTTGGTAGAACCTCTCGCACTCGACTTTGCTTCTCTGGCTCGAAGTATTCGGAAAGCAATTCGAAACAGCGGGGAGATTATTTCTTCCACCGCCATCAAAGGGGTCCGAACCTTGAAAATAATTATACGATATGTTTATCGAATTGGATCGAAAGAACAGGACGGTGAACTTAGAGGAGATCGAACCGTACAGAAGATTATGCGAGAAATCATATTCGATGTCATCGCGACTAAAATTTGCTGCAGCGACATCCGGCAGGATAACTCTGGTGAAATTGTTGTATGAAACATCAAGAAACTTGAGCGCAGGCAAAGATAAAACAGGGCGGGGAATCAAACCAGAGAATCTGTTCCTGCTCAATGTGACTGATTCCAGATTTGAAAGGCCGGAGAAAACTTCGCCCTTTACAGAACCGGAAAGCGAATTGTTCCCAAAGTTGAGACTTTTGAGGCGGTTCAGCTTCTGCAAACTATCAGGCAAAGGCCCGGTCAAAAAATTAGAACTCAAGTTCAATGAAACGAGCGAAGCGATATTTCCAAGAGAAGAGGGTATCGCCCCGGAAACCGATGCGTGGCTGAGGTCAATTAATGCGAGATTCGGGTTTGACAGACCGAACCAGGCCGGGATCTGTCCGGGGAGGGAAAAGCCGGTGGCGTTGAAGGAGGCCAGAAAGGTGAGGTTTTGAACCCCTTCGACCGAAAACAGAGAACGACCGAACCGGGTTCGACGGAGGCCGTGCAGGTTAATGGAGATGACACGGCCGGCGCTGTTGCAGGTGACGCCGGCCCAACTGAAACATGGATCGGCTCCACGTGGCCAGTCGGTCGTGTGGACGGAGAGGGATGAACGGAGGCTGTAGAGGGCGCGGAGATCGTTGGGGGAGGTGCTGATTTGGCCAGAGGCGAAGGACACCGCGAGGTAGAGTGCGACGATGAGGAGAGGCATTGGTTTAATGCATTGCGGGAGACCAAAGTGAGGAGCCTGAAATGCTAAAGATGTTGTTGAAATGGACCGAGCGAAGGAACAAGAAAGCCAGAAAGGCAACGAACCCCTTCCGTGCGTCTCGGCG

Network for GWHGAAEX008168

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	12.550
SRP064423	SRR2545915	Juvenile tuber	5.480
SRP108465	SRR5643513	five period of Gastrodia elata	7.560
	SRR5643514	five period of Gastrodia elata	5.380
	SRR5643515	five period of Gastrodia elata	5.330
	SRR5643524	five period of Gastrodia elata	5.920
	SRR5643525	five period of Gastrodia elata	4.780
	SRR5643528	five period of Gastrodia elata	3.140
	SRR5643658	five period of Gastrodia elata	4.550
	SRR5643659	five period of Gastrodia elata	5.560
	SRR5643660	five period of Gastrodia elata	6.420
	SRR5643661	five period of Gastrodia elata	6.520
	SRR5643662	five period of Gastrodia elata	5.030
	SRR5643663	five period of Gastrodia elata	5.650
	SRR5643664	five period of Gastrodia elata	5.510
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	8.800
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	8.880
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	7.830
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	9.650
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	9.900
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	10.630
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	8.400
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	8.190
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	5.810
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	6.030
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	7.280
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	7.280
SRP279888	Gastro	Gastrodia elata tuber	5.63
	Juven	Juvenile tuber	12.16
	Mother_Gastro	Mother tuber of Gastrodia elata	4.09
	Mother_Juven	Mother tuber of Juvenile	5.16