Detail information of GWHGAAEX008171/evm.TU.scaffold_21.221
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|427724607|ref|YP_007071884.1| | 1.00E-06 | serine/threonine protein kinase [Leptolyngbya sp. PCC 7376] |
| nr | gi|743848188|ref|XP_010939295.1| | 5.88E-143 | PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At2g16250 [Elaeis guineensis] |
| Swissprot | tr|C0LGK4|Y2165_ARATH | 1.00E-114 | Probable LRR receptor-like serine/threonine-protein kinase At2g16250 (Precursor) |
| trEMBL | tr|B9FB99|B9FB99_ORYSJ | 3.00E-136 | Putative uncharacterized protein {ECO:0000313|EMBL:EEE59837.1} |
| TAIR | AT2G16250 | 6.00E-112 | Leucine-rich repeat protein kinase family protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000022 | 6215854 | 6217435 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX008171
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module2 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF07714.16 | Pkinase_Tyr | 48 | 258 | 4.30E-15 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | RLK-Pelle_LRR-XIV |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006468 | Biological Process | protein phosphorylation |
| GO:0005524 | Molecular Function | ATP binding |
| GO:0004672 | Molecular Function | protein kinase activity |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 4.730 |
| SRR2545915 | Juvenile tuber | 2.040 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 7.800 |
| SRR5643514 | five period of Gastrodia elata | 9.100 | |
| SRR5643515 | five period of Gastrodia elata | 4.850 | |
| SRR5643524 | five period of Gastrodia elata | 6.120 | |
| SRR5643525 | five period of Gastrodia elata | 5.160 | |
| SRR5643528 | five period of Gastrodia elata | 3.630 | |
| SRR5643658 | five period of Gastrodia elata | 4.020 | |
| SRR5643659 | five period of Gastrodia elata | 5.450 | |
| SRR5643660 | five period of Gastrodia elata | 6.240 | |
| SRR5643661 | five period of Gastrodia elata | 7.830 | |
| SRR5643662 | five period of Gastrodia elata | 6.880 | |
| SRR5643663 | five period of Gastrodia elata | 7.870 | |
| SRR5643664 | five period of Gastrodia elata | 9.030 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 9.580 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 17.910 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 6.900 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 6.840 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 5.220 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 7.730 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 3.970 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 4.850 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 6.740 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 7.500 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 13.490 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 13.490 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 3.24 |
| Juven | Juvenile tuber | 6.66 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 1.35 | |
| Mother_Juven | Mother tuber of Juvenile | 3.82 |