Detail information of GWHGAAEX008174/evm.TU.scaffold_21.225
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|166367624|ref|YP_001659897.1| | 1.00E-59 | cytochrome P450 [Microcystis aeruginosa NIES-843] |
| KOG | KOG0157 | 0 | Cytochrome P450 CYP4/CYP19/CYP26 subfamilies |
| nr | gi|672124557|ref|XP_008785666.1| | 0 | PREDICTED: cytochrome P450 90B1-like [Phoenix dactylifera] |
| Swissprot | tr|O64989|C90B1_ARATH | 0 | Cytochrome P450 90B1 |
| trEMBL | tr|A0A061DH82|A0A061DH82_THECC | 0 | Cytochrome P450 superfamily protein isoform 1 {ECO:0000313|EMBL:EOX91116.1} |
| TAIR | AT3G50660 | 0 | Cytochrome P450 superfamily protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000022 | 6279737 | 6284437 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX008174
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module14 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00067.21 | p450 | 38 | 459 | 9.30E-55 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Cytochrome P450 Family | CYP90B1 |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K09587 | CYP90B1, DWF4 | Metabolic pathways | map01100 |
| Biosynthesis of secondary metabolites | map01110 | ||
| Brassinosteroid biosynthesis | map00905 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0055114 | Biological Process | oxidation-reduction process |
| GO:0016705 | Molecular Function | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen |
| GO:0004497 | Molecular Function | monooxygenase activity |
| GO:0020037 | Molecular Function | heme binding |
| GO:0005506 | Molecular Function | iron ion binding |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 3.470 |
| SRR2545915 | Juvenile tuber | 3.030 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 33.190 |
| SRR5643514 | five period of Gastrodia elata | 7.970 | |
| SRR5643515 | five period of Gastrodia elata | 27.530 | |
| SRR5643524 | five period of Gastrodia elata | 13.550 | |
| SRR5643525 | five period of Gastrodia elata | 4.240 | |
| SRR5643528 | five period of Gastrodia elata | 8.410 | |
| SRR5643658 | five period of Gastrodia elata | 5.660 | |
| SRR5643659 | five period of Gastrodia elata | 13.620 | |
| SRR5643660 | five period of Gastrodia elata | 4.830 | |
| SRR5643661 | five period of Gastrodia elata | 12.890 | |
| SRR5643662 | five period of Gastrodia elata | 7.930 | |
| SRR5643663 | five period of Gastrodia elata | 5.840 | |
| SRR5643664 | five period of Gastrodia elata | 2.880 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 3.800 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 7.460 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 4.920 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 3.640 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 1.510 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 1.390 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 3.550 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 3.930 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 5.330 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 3.430 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 11.470 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 11.470 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 4.87 |
| Juven | Juvenile tuber | 16.27 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 22.01 | |
| Mother_Juven | Mother tuber of Juvenile | 11.23 |