Detail information of GWHGAAEX008181/evm.TU.scaffold_21.235


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743757630|ref|XP_010922883.1|3.20E-14PREDICTED: desiccation-related protein clone PCC6-19-like [Elaeis guineensis]
Swissprottr|P12951|DHN1_HORVU1.00E-14Dehydrin DHN1
trEMBLtr|Q9M595|Q9M595_ELAGV1.00E-14Dehydrin-like protein {ECO:0000313|EMBL:AAF60172.1}
TAIRAT5G664009.00E-11Dehydrin family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000002266537286654483+
Transcript Sequence

Network for GWHGAAEX008181

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module1

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00257.18Dehydrin131543.60E-34
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0009415Biological Processresponse to water

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms1.580
SRR2545915Juvenile tuber4.880
SRP108465SRR5643513five period of Gastrodia elata3.290
SRR5643514five period of Gastrodia elata2.910
SRR5643515five period of Gastrodia elata18.770
SRR5643524five period of Gastrodia elata0.820
SRR5643525five period of Gastrodia elata101.870
SRR5643528five period of Gastrodia elata51.350
SRR5643658five period of Gastrodia elata224.620
SRR5643659five period of Gastrodia elata12.310
SRR5643660five period of Gastrodia elata3.060
SRR5643661five period of Gastrodia elata12.910
SRR5643662five period of Gastrodia elata3.470
SRR5643663five period of Gastrodia elata2.340
SRR5643664five period of Gastrodia elata2.840
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_11.480
SRR6049655Rhizomagastrodiae_C368-T10_good_10.460
SRR6049656Rhizomagastrodiae_C368-T07_good_16.260
SRR6049657Rhizomagastrodiae_C368-T07_good_13.140
SRR6049658Rhizomagastrodiae_C368-T04_good_12.820
SRR6049659Rhizomagastrodiae_C368-T04_good_10.300
SRR6049660Rhizomagastrodiae_C368-T01_good_12.810
SRR6049661Rhizomagastrodiae_C368-T04_good_12.070
SRR6049662Rhizomagastrodiae_C368-T01_good_13.420
SRR6049663Rhizomagastrodiae_C368-T01_good_17.140
SRR6049664Rhizomagastrodiae_C368-T10_good_11.870
SRR6049665Rhizomagastrodiae_C368-T10_good_11.870
SRP279888GastroGastrodia elata tuber 2.08
JuvenJuvenile tuber0.28
Mother_GastroMother tuber of Gastrodia elata 5.83
Mother_JuvenMother tuber of Juvenile 1.35