Detail information of GWHGAAEX008189/evm.TU.scaffold_21.246


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG41973.00E-10FOG: PPR repeat
nrgi|743833646|ref|XP_010935316.1|3.09E-29PREDICTED: uncharacterized protein At5g43822 [Elaeis guineensis]
Swissprottr|Q6NPG7|Y5382_ARATH3.00E-11Uncharacterized protein At5g43822
trEMBLtr|M0SEQ3|M0SEQ3_MUSAM1.00E-23Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr3P14870_001}
TAIRAT5G438203.00E-10Pentatricopeptide repeat (PPR) superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000002271112067161607+
Transcript Sequence

Network for GWHGAAEX008189

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF15011.5CK2S1242026.50E-18
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms12.030
SRR2545915Juvenile tuber17.680
SRP108465SRR5643513five period of Gastrodia elata7.230
SRR5643514five period of Gastrodia elata5.710
SRR5643515five period of Gastrodia elata3.910
SRR5643524five period of Gastrodia elata7.840
SRR5643525five period of Gastrodia elata4.550
SRR5643528five period of Gastrodia elata4.780
SRR5643658five period of Gastrodia elata6.050
SRR5643659five period of Gastrodia elata5.040
SRR5643660five period of Gastrodia elata3.440
SRR5643661five period of Gastrodia elata5.150
SRR5643662five period of Gastrodia elata5.440
SRR5643663five period of Gastrodia elata3.430
SRR5643664five period of Gastrodia elata4.730
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_15.660
SRR6049655Rhizomagastrodiae_C368-T10_good_10.930
SRR6049656Rhizomagastrodiae_C368-T07_good_14.860
SRR6049657Rhizomagastrodiae_C368-T07_good_17.330
SRR6049658Rhizomagastrodiae_C368-T04_good_17.070
SRR6049659Rhizomagastrodiae_C368-T04_good_17.410
SRR6049660Rhizomagastrodiae_C368-T01_good_18.630
SRR6049661Rhizomagastrodiae_C368-T04_good_16.620
SRR6049662Rhizomagastrodiae_C368-T01_good_12.990
SRR6049663Rhizomagastrodiae_C368-T01_good_14.160
SRR6049664Rhizomagastrodiae_C368-T10_good_18.650
SRR6049665Rhizomagastrodiae_C368-T10_good_18.650
SRP279888GastroGastrodia elata tuber 4.62
JuvenJuvenile tuber11.07
Mother_GastroMother tuber of Gastrodia elata 6.03
Mother_JuvenMother tuber of Juvenile 9.61