Gene detail

Detail information of GWHGAAEX008198/evm.TU.scaffold_21.263

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|428317606\|ref\|YP_007115488.1\|	8.00E-08	NLI interacting domain protein [Oscillatoria nigro-viridis PCC 7112]
nr	gi\|695059419\|ref\|XP_009418069.1\|	1.89E-96	PREDICTED: uncharacterized protein LOC103998344 isoform X2 [Musa acuminata subsp. malaccensis]
trEMBL	tr\|M0U1H4\|M0U1H4_MUSAM	7.00E-96	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr9P18670_001}
TAIR	AT3G29760_2	1.00E-64	Unannotated protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000022	7661921	7685800	+

Transcript Sequence
>GWHTAAEX008198 TGGTTTAAATCCCAAGTTCGACTCCTGCCATCGCAATTTTTATTTTCATCGAAATCTTGCCGAATCCTACCGGTCAGGCCAGTCAAAAAATGAGCATCTCACTCTAAGTATTTTGAATCTGTCTTTCCCCTCTTTCTCTCCCCCTCGCCGACGTCCTCCGATCGTCGGCCTACGCCTGAAGCCTGGCCGATCGCAGTAACTGTGAATCTCTCTTCCTTTCCTTCTCTCCTCAGCCTAAAGTTGTGCTGCTGCCCCGCCAGAGCATTCCCCATTAACAACTATCCGCTCAATCACTGGCAAGACAACCGTTCACCTCCTCTATTAATGTCCAGTTGGCTTAGCTCTTTTGGTACAGATTCACATTTTTTCATGTGAGCTTCTATTTGGATAAGTGTTTATTTAAATTAGTATGGACTTATTTTTGAAGGACTCGTTAGTATTTCGAATATCACAGATTTGCGGTCAATATATTTCCAAGGAAGCAGACAAATTGGAACCAATTCCAGGGGGGAGTTGGCTTTGATATTTAACATGTTTTGAAGATCATATGTAAACGTGGATTAATACATTGCTAACTTGATGATTGGTGTTTTCACAAATTATTTTTCAGATACATATATCGAGTTAGGAGTGCTCTGCTAGCTTGAGCATATTTGAACCAATCATGTGATGGCATGAACAGTGGAGAGAGAGTTAGGGTATTTTTAGTATTATAGATGATGTAAAGATCTGGAATTCAACATCGGATAAATGTATGCACATGTACAAACGATGTGAACCAAATACTTGGCAAGGTTGAGTGAAAGTTGCACCATGAACTTGATTTGGGTGGGTGCTACGGCTTGATCAGCCTAACCTGCCTTTGAGCTTTACATATATGCATCATTTGAAAGTAGATGCTCATGAGATGTATTGGCATAAACGACGGATATGAAATAAATGTATATTATGACGGTTCTTATAGTCTTGGAAAACTATAAAAAGAGCAAGAAGAACAAGCACAGAACCATATGAGCAACGCTTCTATTTTCTTTGACTTTTCAGAGGTTCCCTTTCCAGGAGACATTATTGAGTCATCTTTGCAATTTTCAAAAACTGTCACTGACAGAACAATGGTTCATAGCAATCGAAAAAATACTAGAAGAGCTAGAAGGAGGAACGCTAAGTCTAGAGTCTCCATAAGAGAGGATGATCATGCTGTACCTGTAAAAGTTGTTCAATATTATTGTACATCTTTGGATCAGAAATTAAAAACGGGCTTTCTCTCAACCTCAAACTCTAATCGAGAGTTTTTATTTTCATCATTTGACACTGTTGAAAGTTGTTCAGCTGCGTCGCCTGAAAAGGCTGATTCATTACTGGATAATAGACAGACCACAAAGATTAGGCGTAGTCGACGGTCCAAAAGAAGAGGGAATTATGGCCGCAGTGATATACTGCACTTGTCTTATATGCTCCAACCTCAATCTGATTTTGGCTCAAATCAATGGTTTTCTATGCCAATACCAGAATGCAGAAATGATTCTGAGAAATTAAATTTCATTCCATCACTGCCTGCAGCTAATAAATTGGTGCCATTAAGTGAAAGAGATCAATGTTCATTGACCAACATTGCATCTGTTGACTTTTGTTGGAAAAATGAAGCTTATGAAAACCACTATGCCGACGCATCAAGTTTGCCTGATAATATCATTCATGAAGGCACTGGAGCTACTAGCGCTTCAGCATTAAATGTTAAAAATTCTTCGATCGAGGAAAAAGATGTCCCTCATTTTTTAGTTAAAAGAGCATTGGAAAGCTCTTATAGAAAAAAATTACTTGTCCTTGACCTCAATGGCATTCTTTGTGATATTGTTTGTGGTTCTAATGGTTCTTGTTTGCCACATGGGAAGGTTAACAAGCGATTAGTTTTTAAAAGGCCCTTCTTGGATGATTTTCTTGACTTTTGTTTTGAGAGGTTTGCTGTAGGCATCTGGTCTTCAAGAAACAAAAAGAACATCACTGGAGTCATCAATTATGTAATGGGGGATTCCAAAGATAGACTGCTGTTTTGCTGGGATCAATCCAAATGCACAGTTACAGGTTTTAATACACTTGAAAATAGGCATAAACCAATATTGTTAAAGGAGTTGATTAAATTGTGGGATAATGAAGAAGATAGCCTTCCATGGGAGAAGGGGGAGTACTCTCCATCAAATACTTTACTGGTGGATGATTCACCATACAAGGCCCTCTGCAATCCTCCTTACACCGGTATATTTCCTTTTCCATATGATTTTCGAGACGAAGATGATAATGTTTTAGGGCCAGGGGGTTCAATTCGAACTTATCTAGAGAGCATTGCCATGGCTGCTGATGTCCAAGAGCACGTGAAGGATCACCCATTGGGTCAAAAGGCTATAACTTCTAAAGACAGAATGTGGAATTTTTACAAGAACATAATTAACAAGAACAAATCCATGGCTTTAACCCCACACTGCTGGTAAATGTTCATTTTATTGAGCTTTATTTAAATTTCTGAGACTGCAGCATGCCATTGTGAATGTTCATTAGCTGAGTGCTAGCAAGTTTCTACAATGCACTAGAGCTGGACTGCTGTAATTTTACTAAAAGAATATAGCGGTCCGAGTGGAAGTTAAGGCATGGGTGCGCTCTCTGCTGATTGATCCCAGATTTATGACATAGGGTTATATTTAAACGTCTATTTCCTGTGGTCAAACGGTGCGCCTCACCCATTTAATGAGCTGCATTCTTTTGCCTTTTGTCTTCTGGTCAAACTAGCTGTCGCAATTTCTTTGTGTACTGTTTGATAATTGTTGTTTCATAAGCAATATGAAAGATGGATCAGTTTCTAACTATTCTTTTAACTGAGAAAACTCATCTTCTTTGGGCCATGTTTGGTTGGATTTCGACATAGAGCGAAATGTGAACTTGCAGACCAAATCTTTTAGGTGTTTACCTGACAATTACTCGAATTTTTAATTTTACATTGCCGTTCCGTAACTTCAAGTCAGAAATCTCAACTACCTACAACGATTGCAAGAA

Network for GWHGAAEX008198

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF03031.17	NIF	268	451	1.10E-20

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	16.520
SRP064423	SRR2545915	Juvenile tuber	13.710
SRP108465	SRR5643513	five period of Gastrodia elata	12.100
	SRR5643514	five period of Gastrodia elata	13.830
	SRR5643515	five period of Gastrodia elata	13.580
	SRR5643524	five period of Gastrodia elata	15.620
	SRR5643525	five period of Gastrodia elata	14.800
	SRR5643528	five period of Gastrodia elata	16.050
	SRR5643658	five period of Gastrodia elata	17.010
	SRR5643659	five period of Gastrodia elata	10.350
	SRR5643660	five period of Gastrodia elata	9.010
	SRR5643661	five period of Gastrodia elata	9.030
	SRR5643662	five period of Gastrodia elata	8.190
	SRR5643663	five period of Gastrodia elata	10.080
	SRR5643664	five period of Gastrodia elata	7.360
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	11.310
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	15.120
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	12.050
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	10.920
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	11.020
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	11.510
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	11.930
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	12.390
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	11.990
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	13.640
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	12.990
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	12.990
SRP279888	Gastro	Gastrodia elata tuber	10.77
	Juven	Juvenile tuber	9.76
	Mother_Gastro	Mother tuber of Gastrodia elata	12.40
	Mother_Juven	Mother tuber of Juvenile	7.66