Gene detail

Detail information of GWHGAAEX008199/evm.TU.scaffold_21.262

Functional Annotation

Database	Orthologs	E value	Annotation

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000022	7674895	7677161	+

Transcript Sequence
>GWHTAAEX008199 GGGTTTTAACCTAATTTGAAAAGTAACGACATCGGGTCGTTACACAATCAGATATTTGCATGGATGATTTTGGGATTCTATTTGATGGTATTTGTCTTTGGGTTCTTGCTAATTGCTATCTTCGCTTAGTAACATTTTGGTGGATATGCATAAAGAGAGATGGTAGTGTCTCTCTGATTCTCTTGATTGGATGTCTAAAGCATAGGCGCCTGCTCTGCCAAACCTCATCTATGCTAAGGATCTAGGGTGTATTGTTGTCTTGGAAGGCCAAAAGCTGTATGGTAAGTTTACTCATATGATATGTCTTTAGCAGAAGCATAATGCTTAGTGTGGGTGATCAAAAGTGATGTATACGTAATAGATTTATGTTTAGTTTTGCATAACATATACTATCATTTTGAGATTTAGTGGATTTTGTTTATGTATAAACAAATATTAACATTGCATTCTTGGCTCTTGGCATTTTTTATGTTGTGCCAATGTCGATAAGAGTTAGTGCTACATGGTTTTTCTCATATTTTTTGAGTGCTACAATATAAGTATAGGTAAAGCTGTTGGAAGAGGAAAGATTTTATTGGATGTTCTTTGAGGGATCAATCTCTGGATTGTGCGATGAGTGTGCAAGCATGAGCATTATTCTATTAAGAGATTATTTTATTTTATTTGAGAAGCCTGTAATGCGGATTCTTTTGTAGAGAGATTTTGTGTTGTGGGAATGGTAATAATGTACTTTTATTATAAGCTAACTTTTTTTTTAGCTTTGCAATGTTACATATGTTCAATCCAACTCAACTTGACCAAACTTTTTGGGTTTGCAGGCTCAGCTGGGTATGCAATGATACTTTGTAATAAAGTGGCTATCATCAAGTGATGAATCCATTATAGGATGCCACGCCTTAAAAGTTTCAAGGCGATTTTAGGTTCAGAACAACCATTAGTAGCTCGCTATCGGCATGGTTACTGCCTTCATTCACATCAAACTGTGCGGCCCATCAAGTTTTATGACTCATGTGGTCCACCAACAAAGGCAATTGGCCAAGCTGATTGCAATGATTGTCAATTGCTTGTTTGTCTTGCTCCATATCCTTTTACTCATGCTTCTGCCATTGTTCGCCTGGGTTACCCATTGACTTGCGCCAATCTGACATGTGCTGAGATAACTATAACCTGTTGTGATCACCAATGTTGCCCAGGTCTGCGAAACTTATTTATTCATGATCAGTCATAACCTGAGTTGTAACTCGCAATTTACGTTCATCAATAGGCCCACATGCCTGCACCCGTTGCTCGACAACTACCCAAGTATTATTCCTATTAATACTTGTTTATTTTATTATGATCTACATTTTTCTCATTGATTTAGGGATTTTATACTACAATTGTGTTATCCCTACTAGTAAGTCTACTCATACAAGCCAGACTCATCATTGAGAGCGCCTACTCTACCTTTTAAGATTCCTATGAGTTTGAGTTCTCCACGTAAGTGAGCCCACTTTTGATCAGGCTATGTTTAATCATCTTACTACATTCACACTCTAGGTTTACGAGTTGTGCAATATCAAGTTTTCACTTGTCTTAGCTTCAAATTTCTTGGGAACATTTAATTGAGGAAGATCACTGACATTACTAGTAACATCCTTATTATTCATCTTGAATTCAATTTTTCTTGCATTTAGCAGACCATATTTTCTCCAAGAGCGAATACTTTAGAGACCATGAAGCCTTATTTAAAACAATCCAAGATATCAAAGCATCGTTAGGAACTACACAAGATAATTTCATGGAATTACAAGAGCGCTTGCTTTACTAATATTGAGGATGTTCTTCGAATGTTGAAGGATCATTAGGATGAATCCTTTGATTTAGTTCTAATTTCCATGTTTGAAGATGATTATCATCTACAATAGCCCATCCTTTAGAAATCAACTTGACCATAATTGTAACAACTAAAAAAAACTTCTGTGATACCATTGTGCCTTCAAAATTGTATTTAATAACTTGTCAAGTCAAGAATCTCATTCCTCACCCAAAAAAGTTTCATGCATCAATAAAATTGCCATCTCATGATATGGCTTACACCATTTTTTAAAGCATTCCAAAACTCTACTTAACTCAGTTGATGAATGAATGTTTACTTAGATCTGTTAAATCAACTCATTTTAATTGCCTTATTTTAGCTTTCATTAAAATATTTTGAAATTAGTTTATTCACATATAATAATGCTATCATCTTTGAAAATATTTTATCATTATTTTTTATATGGTTC

Network for GWHGAAEX008199

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	2.000
SRP064423	SRR2545915	Juvenile tuber	1.840
SRP108465	SRR5643513	five period of Gastrodia elata	0.650
	SRR5643514	five period of Gastrodia elata	1.810
	SRR5643515	five period of Gastrodia elata	1.950
	SRR5643524	five period of Gastrodia elata	1.850
	SRR5643525	five period of Gastrodia elata	0.750
	SRR5643528	five period of Gastrodia elata	1.140
	SRR5643658	five period of Gastrodia elata	0.470
	SRR5643659	five period of Gastrodia elata	1.120
	SRR5643660	five period of Gastrodia elata	1.430
	SRR5643661	five period of Gastrodia elata	0.750
	SRR5643662	five period of Gastrodia elata	0.700
	SRR5643663	five period of Gastrodia elata	1.680
	SRR5643664	five period of Gastrodia elata	1.020
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	1.100
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	0.530
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	1.170
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	1.030
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	1.330
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	1.170
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	1.500
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	1.150
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	1.040
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	1.360
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	1.020
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	1.020
SRP279888	Gastro	Gastrodia elata tuber	1.27
	Juven	Juvenile tuber	1.78
	Mother_Gastro	Mother tuber of Gastrodia elata	0.77
	Mother_Juven	Mother tuber of Juvenile	1.12