Gene detail

Detail information of GWHGAAEX008205/evm.TU.scaffold_210.4

Functional Annotation

Database	Orthologs	E value	Annotation
KOG	KOG0239	0	Kinesin (KAR3 subfamily)
nr	gi\|743756184\|ref\|XP_010915519.1\|	0	PREDICTED: kinesin-4-like [Elaeis guineensis]
Swissprot	tr\|Q8W1Y3\|KP1_ARATH	8.00E-180	Kinesin KP1
trEMBL	tr\|M0UAJ4\|M0UAJ4_MUSAM	0	Kinesin-like protein {ECO:0000256\|RuleBase:RU000394}
TAIR	AT1G63640	0	P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000223	172714	218701	+

Transcript Sequence
>GWHTAAEX008205 CCCATCTGGAGTCTTATTTTGCTCGCCATTTACTCCGAAAACGAAGCCTCCCAATTTTAAAAAATTCCGATAAATGCGATTAGGAGAGGAAAGAGAGGAGCAGGAGCGTTACCAAGGGGAGGAACGGAGCAGAGCTACAGTCAGCGGGAGATGAACTGCATTGTTGAACTGGTTCTTTACTGATAATTAGGGCTTCAGCTCTTCGGTTACCTTGATTTTGTTTTGTTTTGTTCAACGGAGTCACTTCTCGTGCTTATTTAGTTCGCGAAGGCAGCCGTTATAATTTATGCTGGATTTGCTCGCCTCGGTTTGCTTAATTTGTTGCTGCTTTACCTATGGGCTCTCCACTTGACCTGTGCCCTAATTTTGCATAGCTCTGATGCGCTGATCCTGGGAAATGCATTTAGTTTGGAAGGAAATTTTTGTATGTTACTCGTGCAGGGATTTTACTTAAGTCATCTGTGATATATTGAATTTCTACATGAAGCCACGAATCTTGAGCGGCTTGGTTGCAGTTGAGAAGGGTCTATCAAGGTGAAATGTCTCGGTTTGAAATGATAGTTTGAATTAGCAAGCGGGGGATAAAACGATCGACTATATGGGAAGCAACAATCCAGAAGATATGTTAGACCAATCAACGGTGTTATTGAAACCAGTAGGACATCAGTTTCAAGAGGTGCTTGAAGCAACGAAGCTACATCATTCAGATTTTATTGTGTCCAAGGTTTCAGAAATTATGAGATCAAATGGTTTAGATAATGCTCCGATCCAATCACTTTTAGGCATCATTAACCGAATTCTTGATGAAAGTATTGAGAAGAAAAATGAAGGAATTCCTCTTAGAGTTGCAAGTTTATTGAGAAAAATTATGCAAGAGATTAAGCGACACATTTTTATGCAAGCTGAGTATATTAGAAATCAAAATTATATTGTTAAAGCACGCGAAAGGCAGTATAAATCAAGAATTATGGTGTTTGAGACACTGACATTTGGAGCAATTGAAGAAATACAAATTTTATCGAGTCAACTTCAGATGGTAAAGGGACAGAAAATTAAAATGGAAGAGTGTAAGCAACAAGAGGAGAAGTATGCATTGAAGTTATTGAAAGAAAAAGAAGCTAGTGATCAAGTAATTATAGACCTTAAGCTAGATTTGGAAACAGCAAAAAACACATACAAACTTCATTACCAGCACTTAGAAATTGAAGCCAAGCAAAATAAAGCAAGATTACAAGAAAGAATAAAGGATGGGGAATTTTTGCTATCAACATCAACTAGGAGGATAAATGAACTCGAGGCCCTCTTTGAGTCAAAGTCTAAGAGTTGGAATCAAAAGGAGAACATGCTTCTCAATTTTATATATTCTCAACTACGGGAAGTACAGAGTTTGAGATTGTCTTCAGAAGACATCAAGGCAGAAGTAGTAAACTCACAAAGGAAATGGAAGGAAGAAATGAGTAGCATGGGGGTTAGACTTAAAATTTTAGTAGATGCTGCCGAAAACTATCATGCAGTTGTTGCAGAAAATAGAAAGTTATTTAATGAAGTTCAGGAACTTAAAGGAAATATAAGAGTGCACTGTCGGATAAGACCATTTTTACACGGGCAAAATTCTAAGCTGACAACAATAGATTACATTGGTGAGAACGGTGAGCTTATTCTTGTGAATCCCTCAAAACAAGGAAAGGATAGCAATCGAATGTTTAAGTTCAACAAGATCTTTGTTCCAACTGCTACTCAAGAACAAGTTTATTTAGATATTCAACCACTTATTCGATCTGTTCTTGATGGCTACAATGTGTGCATCTTTGCATATGGTCAAACTGGATCGGGTAAAACTTTCACAATGAGTGGACCGAGCTTTTCTTCAAAGGAAGAATGGGGAGTTAATTTTCGTGCTCTTAGTGATTTATTCCATTTATCTCAAGTGAGGAGAAATGCTTTTGCATATGAAGTTGCAGTTCAAATGGTTGAAATCTATAATGAGCAAGTTCGTGATCTGCTTTCAATTAATGACTCACAGAAACGACTTGGGATTTGGAGTATTTCACAGCCCCATGGTTTAGTTGTTCCTGATGCAAGCATATTTACGGTTAAATCAACCTCAGATGTTATGGAGTTGATGCAATTTGGGCAAACCAACAGGGCTGTTGGTTCAACTGCATTAAATGAAAGAAGTAGTCGATCCCACAGCATTCTCACCATTCATGTTCGAGGTGTAGATTTGAAAACTGGCTCCACTTCAAGGGGCTGTCTCCATCTAATAGATCTGGCAGGAAGTGAGAGAGTTGATCGTTCCAAAGCAGCAGGAGATAGGCTCAAAGAAGCACAACACATAAACAAATCTCTTTCAGCCCTTGGCGATGTCATATTTGCATTGTCTCAGAAAAGCTTGCATGTACCATACAGAAACAGCAAACTTACTCAAGTTCTTCAGAGTTCACTAGGTGGGCAGGCAAAGACACTAATGCTTGTTCAGATTAATCCAGATATAGAATCATACTCGGAAACACTAAGTACCTTAATGTTTGCTGAAAGAGTGTCTGGAGTGGAGTTAGGTGCTGCAAAGAGTAATAAAGAGGGAAAAGATATGAAAGATTTGATTGAACAGGTGGCATTCTTAAAGGATACAATATCAAGAAAAGATGAGGAAATTGAACAATTGCAACTACTAAAAGGTTCAAAAAAGCATTCTTCTGAGAGCAGCTCTTTGAGGCAGGCTTCATCTCCTTGTGTCTCCTCATCCTTCGGCGGACTAGCGCAACAGAGCAGTGGAAAACAAACTAAATTTTCAGAAAGAGATGTCGTTTCAGCCTCCCATAATTTTTCTGAATTCCAAAATTCTGTTACTGGTTCTCTGTTGTCCGTGCTCAATGGAGGAGCGAAGGCAGCAAGCAACCATGCTGCTGATGAAGAGACTATGGGCTTTGCTGAAGAAGAAGAGTCCGAGGGCATGCTGAGTGGCGCTTCTGATGGAGAAGCTGAATTTTCCATGAGCAGCTCCTTGGATTCACCCTTTGTTTCCGAGTTCGGCAAACCATTCACAAATATGATGGAGAGGATGCCAAAGCCTCCACCGAGGATACCCAGATTACTGGCACAGAGAGGAGCCGGCCCTTCGCTCTCAGCACGACCAAAGTCTACTGATTCATTGAAGTCGCTTGCTTCGAAGAAAACATGCAGCCAAGTTTCATCTTCCTCAGCAAAACAATATAAACGGTAGCTGTTCGAAAGAAGGGCGTCTTTGTGTTATTACAACGTGCTTTCTAAAAACGTTTTTTTATTTAATATTTTGTAGCTTTGCTTTTAGGAAATGAAATATCATTATAATTATTAATGTTATTAATTGTTATTATTATTATTATTCGTATAATTTAGCACAAGTTACTCATTATTAATTGCTGTCTTCCTTAAATTTTGATTGCAT

Network for GWHGAAEX008205

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00225.22	Kinesin	329	649	2.00E-103

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0007018	Biological Process	microtubule-based movement
GO:0005524	Molecular Function	ATP binding
GO:0003777	Molecular Function	microtubule motor activity
GO:0008017	Molecular Function	microtubule binding

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	41.220
SRP064423	SRR2545915	Juvenile tuber	47.850
SRP108465	SRR5643513	five period of Gastrodia elata	28.070
	SRR5643514	five period of Gastrodia elata	30.520
	SRR5643515	five period of Gastrodia elata	26.960
	SRR5643524	five period of Gastrodia elata	29.640
	SRR5643525	five period of Gastrodia elata	22.200
	SRR5643528	five period of Gastrodia elata	18.710
	SRR5643658	five period of Gastrodia elata	20.610
	SRR5643659	five period of Gastrodia elata	25.190
	SRR5643660	five period of Gastrodia elata	28.160
	SRR5643661	five period of Gastrodia elata	24.210
	SRR5643662	five period of Gastrodia elata	20.450
	SRR5643663	five period of Gastrodia elata	23.860
	SRR5643664	five period of Gastrodia elata	20.120
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	38.050
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	31.700
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	34.750
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	46.040
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	55.120
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	61.110
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	42.140
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	49.940
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	35.140
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	36.170
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	35.750
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	35.750
SRP279888	Gastro	Gastrodia elata tuber	30.95
	Juven	Juvenile tuber	30.09
	Mother_Gastro	Mother tuber of Gastrodia elata	38.34
	Mother_Juven	Mother tuber of Juvenile	35.22