Detail information of GWHGAAEX008214/evm.TU.scaffold_211.7


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|297565110|ref|YP_003684082.1|1.00E-12Kelch repeat-containing protein [Meiothermus silvanus DSM 9946]
KOGKOG10725.00E-68FOG: Kelch repeat
nrgi|672111607|ref|XP_008801509.1|1.18E-124PREDICTED: LOW QUALITY PROTEIN: F-box/kelch-repeat protein SKIP20-like [Phoenix dactylifera]
Swissprottr|Q9M1Y1|SKI20_ARATH2.00E-68F-box/kelch-repeat protein SKIP20
trEMBLtr|M0T4U3|M0T4U3_MUSAM2.00E-104Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr6P06940_001}
TAIRAT3G599405.00E-68Galactose oxidase/kelch repeat superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000205636272637348-
Transcript Sequence

Network for GWHGAAEX008214

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01344.24Kelch_11541961.90E-13
Protein Sequence

Gene family

Gene familysubfamily
Ubiquitin FamilyF-box

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0005515Molecular Functionprotein binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms20.620
SRR2545915Juvenile tuber37.130
SRP108465SRR5643513five period of Gastrodia elata51.620
SRR5643514five period of Gastrodia elata52.280
SRR5643515five period of Gastrodia elata46.490
SRR5643524five period of Gastrodia elata70.210
SRR5643525five period of Gastrodia elata184.680
SRR5643528five period of Gastrodia elata84.640
SRR5643658five period of Gastrodia elata99.000
SRR5643659five period of Gastrodia elata67.390
SRR5643660five period of Gastrodia elata90.180
SRR5643661five period of Gastrodia elata108.400
SRR5643662five period of Gastrodia elata98.480
SRR5643663five period of Gastrodia elata69.490
SRR5643664five period of Gastrodia elata58.730
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_129.040
SRR6049655Rhizomagastrodiae_C368-T10_good_121.480
SRR6049656Rhizomagastrodiae_C368-T07_good_133.490
SRR6049657Rhizomagastrodiae_C368-T07_good_119.930
SRR6049658Rhizomagastrodiae_C368-T04_good_138.640
SRR6049659Rhizomagastrodiae_C368-T04_good_130.920
SRR6049660Rhizomagastrodiae_C368-T01_good_114.440
SRR6049661Rhizomagastrodiae_C368-T04_good_134.140
SRR6049662Rhizomagastrodiae_C368-T01_good_153.240
SRR6049663Rhizomagastrodiae_C368-T01_good_125.060
SRR6049664Rhizomagastrodiae_C368-T10_good_182.680
SRR6049665Rhizomagastrodiae_C368-T10_good_182.680
SRP279888GastroGastrodia elata tuber 84.38
JuvenJuvenile tuber137.58
Mother_GastroMother tuber of Gastrodia elata 223.66
Mother_JuvenMother tuber of Juvenile 336.35