Detail information of GWHGAAEX008229/evm.TU.scaffold_212.10
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|158334647|ref|YP_001515819.1| | 2.00E-08 | lipase [Acaryochloris marina MBIC11017] |
| KOG | KOG4569 | 2.00E-70 | Predicted lipase |
| nr | gi|672170363|ref|XP_008805240.1| | 1.48E-83 | PREDICTED: phospholipase A(1) DAD1, chloroplastic-like [Phoenix dactylifera] |
| Swissprot | tr|Q948R1|PLA11_ARATH | 4.00E-72 | Phospholipase A(1) DAD1, chloroplastic (Precursor) |
| trEMBL | tr|G2XMI5|G2XMI5_ORYBR | 1.00E-82 | Hypothetical_protein {ECO:0000313|EMBL:CBX25385.1} |
| TAIR | AT2G44810 | 2.00E-70 | alpha/beta-Hydrolases superfamily protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000212 | 382697 | 383716 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX008229
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF01764.24 | Lipase_3 | 120 | 265 | 4.10E-29 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K16818 | DAD1 | Metabolic pathways | map01100 |
| Biosynthesis of secondary metabolites | map01110 | ||
| Glycerophospholipid metabolism | map00564 | ||
| alpha-Linolenic acid metabolism | map00592 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006629 | Biological Process | lipid metabolic process |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 0.000 |
| SRR2545915 | Juvenile tuber | 0.000 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 0.000 |
| SRR5643514 | five period of Gastrodia elata | 0.000 | |
| SRR5643515 | five period of Gastrodia elata | 0.000 | |
| SRR5643524 | five period of Gastrodia elata | 0.000 | |
| SRR5643525 | five period of Gastrodia elata | 0.000 | |
| SRR5643528 | five period of Gastrodia elata | 0.090 | |
| SRR5643658 | five period of Gastrodia elata | 0.070 | |
| SRR5643659 | five period of Gastrodia elata | 0.000 | |
| SRR5643660 | five period of Gastrodia elata | 0.000 | |
| SRR5643661 | five period of Gastrodia elata | 0.160 | |
| SRR5643662 | five period of Gastrodia elata | 0.000 | |
| SRR5643663 | five period of Gastrodia elata | 0.000 | |
| SRR5643664 | five period of Gastrodia elata | 0.070 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 0.000 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 0.000 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 0.000 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 0.000 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 0.000 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 0.000 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 0.000 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 0.000 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 0.000 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 0.000 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 0.000 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 0.000 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 0.00 |
| Juven | Juvenile tuber | 0.00 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 0.00 | |
| Mother_Juven | Mother tuber of Juvenile | 0.00 |