Detail information of GWHGAAEX008233/evm.TU.scaffold_212.17


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|672163836|ref|XP_008801777.1|3.86E-114PREDICTED: UPF0496 protein 4-like [Phoenix dactylifera]
Swissprottr|Q9LMM6|BPS1_ARATH2.00E-78Protein BPS1, chloroplastic (Precursor)
trEMBLtr|M0SFP6|M0SFP6_MUSAM4.00E-95Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr3P18300_001}
TAIRAT1G015507.00E-78Protein of unknown function (DUF793)

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000212508885513740+
Transcript Sequence

Network for GWHGAAEX008233

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF05633.10BPS1321575.40E-11
PF05633.10BPS11743367.80E-07
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms52.490
SRR2545915Juvenile tuber74.510
SRP108465SRR5643513five period of Gastrodia elata72.110
SRR5643514five period of Gastrodia elata60.110
SRR5643515five period of Gastrodia elata76.200
SRR5643524five period of Gastrodia elata69.390
SRR5643525five period of Gastrodia elata93.460
SRR5643528five period of Gastrodia elata96.070
SRR5643658five period of Gastrodia elata89.520
SRR5643659five period of Gastrodia elata70.280
SRR5643660five period of Gastrodia elata77.660
SRR5643661five period of Gastrodia elata69.740
SRR5643662five period of Gastrodia elata74.740
SRR5643663five period of Gastrodia elata63.790
SRR5643664five period of Gastrodia elata63.750
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_155.080
SRR6049655Rhizomagastrodiae_C368-T10_good_125.310
SRR6049656Rhizomagastrodiae_C368-T07_good_150.540
SRR6049657Rhizomagastrodiae_C368-T07_good_158.590
SRR6049658Rhizomagastrodiae_C368-T04_good_164.690
SRR6049659Rhizomagastrodiae_C368-T04_good_176.830
SRR6049660Rhizomagastrodiae_C368-T01_good_155.590
SRR6049661Rhizomagastrodiae_C368-T04_good_164.880
SRR6049662Rhizomagastrodiae_C368-T01_good_145.960
SRR6049663Rhizomagastrodiae_C368-T01_good_148.570
SRR6049664Rhizomagastrodiae_C368-T10_good_148.260
SRR6049665Rhizomagastrodiae_C368-T10_good_148.260
SRP279888GastroGastrodia elata tuber 76.27
JuvenJuvenile tuber58.04
Mother_GastroMother tuber of Gastrodia elata 202.79
Mother_JuvenMother tuber of Juvenile 104.86