Detail information of GWHGAAEX008234/evm.TU.scaffold_212.18


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|470156208|ref|YP_006284710.1|6.00E-26Leukotriene-B4 omega-hydroxylase 3 [Pectobacterium sp. SCC3193]
KOGKOG01564.00E-153Cytochrome P450 CYP2 subfamily
nrgi|672162319|ref|XP_008800986.1|0PREDICTED: cytochrome P450 89A2-like [Phoenix dactylifera]
Swissprottr|Q42602|C89A2_ARATH2.00E-133Cytochrome P450 89A2
trEMBLtr|F2DHI1|F2DHI1_HORVD4.00E-164Predicted protein {ECO:0000313|EMBL:BAJ94552.1}
TAIRAT1G649404.00E-153cytochrome P450, family 87, subfamily A, polypeptide 6

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000212520854522940-
Transcript Sequence

Network for GWHGAAEX008234

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module13

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00067.21p450384823.80E-84
Protein Sequence

Gene family

Gene familysubfamily
Cytochrome P450 FamilyCYP89A6

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0055114Biological Processoxidation-reduction process
GO:0005506Molecular Functioniron ion binding
GO:0020037Molecular Functionheme binding
GO:0016705Molecular Functionoxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms51.820
SRR2545915Juvenile tuber38.090
SRP108465SRR5643513five period of Gastrodia elata228.910
SRR5643514five period of Gastrodia elata108.520
SRR5643515five period of Gastrodia elata241.600
SRR5643524five period of Gastrodia elata170.300
SRR5643525five period of Gastrodia elata331.870
SRR5643528five period of Gastrodia elata526.130
SRR5643658five period of Gastrodia elata198.290
SRR5643659five period of Gastrodia elata397.060
SRR5643660five period of Gastrodia elata391.260
SRR5643661five period of Gastrodia elata496.080
SRR5643662five period of Gastrodia elata500.230
SRR5643663five period of Gastrodia elata343.270
SRR5643664five period of Gastrodia elata722.990
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1158.210
SRR6049655Rhizomagastrodiae_C368-T10_good_1167.660
SRR6049656Rhizomagastrodiae_C368-T07_good_1146.100
SRR6049657Rhizomagastrodiae_C368-T07_good_1130.470
SRR6049658Rhizomagastrodiae_C368-T04_good_1148.870
SRR6049659Rhizomagastrodiae_C368-T04_good_1176.520
SRR6049660Rhizomagastrodiae_C368-T01_good_1154.000
SRR6049661Rhizomagastrodiae_C368-T04_good_1155.360
SRR6049662Rhizomagastrodiae_C368-T01_good_190.910
SRR6049663Rhizomagastrodiae_C368-T01_good_1122.480
SRR6049664Rhizomagastrodiae_C368-T10_good_1146.340
SRR6049665Rhizomagastrodiae_C368-T10_good_1146.340
SRP279888GastroGastrodia elata tuber 152.09
JuvenJuvenile tuber45.42
Mother_GastroMother tuber of Gastrodia elata 285.97
Mother_JuvenMother tuber of Juvenile 132.88