Gene detail

Detail information of GWHGAAEX008245/evm.TU.scaffold_212.30

Functional Annotation

Database	Orthologs	E value	Annotation
KOG	KOG1171	1.00E-120	Metallothionein-like protein
nr	gi\|743757150\|ref\|XP_010920528.1\|	1.22E-148	PREDICTED: protein tesmin/TSO1-like CXC 5 [Elaeis guineensis]
Swissprot	tr\|Q9SL70\|TCX6_ARATH	4.00E-121	Protein tesmin/TSO1-like CXC 6
trEMBL	tr\|M0TAH1\|M0TAH1_MUSAM	3.00E-140	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr6P26760_001}
TAIR	AT2G20110	1.00E-120	Tesmin/TSO1-like CXC domain-containing protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000212	712918	728853	+

Transcript Sequence
>GWHTAAEX008245 CCTGTATTGAGTTTCCCCTCTTCTCAAAATTTTCCTGCAGCGCTCATAGAAAAAGAGAGCGAGAGAGGAGGGTTGCACGGGAGCGTGGAGGCCAACGAACGAAAAGAGATCGATCTTCCCTCTGCTCATTCTTCTCGTCGCTTGATCTCTTCAGTGTGATCCAGTCTATCATTTACTCTGTCGATTCAACCCGACAGTTCTGCATCCATCTCCGGCAATTGCTCTGTCGAACTCAACTGGATCGAGAAGCCCTCAAATCGGGACATATTCTTGTGGTGGATGGGGAACCGCTGTTTTTCACTTCGGGAATGAAGCATTTGAACGCCGCCATCAGTTTGCTCTCGAGCATCTGTCCGTCGACCTATTAAACGGCTCCGATGGAGCAAGGAACTAAATCTGCTTCTTCGGAGCCATCAGATTTTCCTGCTAGGAAGCTTGTTAGGCATCTGGACTTCACACCTGCTGATTGTTTGTCGCCAGCGTCAATGAACTTGACGATTCCGGTTTCTTTCGATCAACCACCGTCGACGGCGTCTGTATTGCAGCAGCAAATTCAGAATCAGATGCTTGTACCTTCGCTGACCATTTCACTGCCATCGATTCTTGTACTGGATGACTTTTTTAGAAAACCTGAGTCGCCAAAAACAAGGTCAAAACCTTTTCTTGAAGTGAAAGAAGGTACACCAGCAAGAAAAAAGAGCTGCAACTGCAAACACTCACGATGTCTAAAGCTGTATTGTGAGTGTTTTGCATCTGGAGTTTATTGCGACGAGTGCAACTGTACAAATTGTTTTAACAAAGTAGAAAATGAAACAGCTAGGCATGAGGCAGTTGAAGCTACTCTGGAACGAAATCCCAATGCTTTCAGACCAAAGATTGGCAATAGTCCGCAAACCATTGATGATGTCAGGGAAGATACAGTTGAAGTAGCTTTAGCAGGTAAGCATAATAAAGGCTGCCATTGCAAGAAATCAGGATGTCTCAAGAAATACTGTGAATGCTTCCAGGCCAACATTTTCTGCTCTGAAAATTGCAAGTGCATGGATTGTAAAAACTTGGAAGGGAGTGAAGAGAAGAGAACCCTTTCCTATAGGGATCATGGGGACGGCATGAGTTGCATGCAACATGCAACCAATTCTACTTTAAACGGGGCTGTTGGTCCTTCAATCCATGAATCACCTGCATCAAAGAAGAGAAAGTGCCAGGATATCTCTTTTGGATTAACTGCTAAAGATCAATCTATTCGCAGGGTTGTCCAACTCCCACAGAGTTCAGAGCCTGGTTCCTTTCCTTCTGTCCCAAGTGGTCATGCTTCGAATCTTTGCTCAACTTCATTAGGATCATTAAAAGTTTTATATAGGCCACTACTTGCTGATATTGTGCACACACAGGATGTGAAGGAGCTCTGCAGGATATTGGTGGTAGTAGCAAGAGAAGCTGCCAAAACAGCAGCCGATGATAAAAGAGTTGTTGAGGCGGAAACACAAACAGAGAGCTGCTCAGTAGCTTCATCAAACCGCTGCGGAACGTTTGCGGCCGTTGATCTGAAGGAGGAGGCGGGAAGGGCGATGTCTCCAGGAACTCTAGCGCTGCTGTGTAACGAGGGAGACGCCCTGTTCACGTCATCTTATGATGACTCAGAAGATCCGTGTTCGAGGAGTCTCCCTTGCGACCAGAACGCGGCGGACGTCTTTGCCGAGCAGGAGAAGCGCGTGCTGGTGGCTTATCGAGAGTCCCTCCTTAAACTCATCAATTGCGGGACGGCCAAAGAAGCAAATTTTGTATCAAATGCTCTAAAAGCAGAAAAATCCAGCGATCAGAAGCCACTCAATAATAGCATTAAGCAAAATTCTCATCAATGGCTGTAAAAGTAGAGAAACCCGGCCTTAAGAAGCCACTCGATAATAGCATTGTAAGTTCCTTGCCAACCTCATCAAAAACCAATTTTCCTTCTATTGAAAATGGCATCATAAAATCTAAGCCTGAGAGTATTGGGGGTGCAAATTGTAAATAAGTAGGCATTCTTTATCTTGCAAACTATACCGAAATCCCTGAATTTATTTATCAAATGGGGATCACATTTCATGCATGCATATCATTAGATATTAGCTTAATAAATTCAGAGTTTGGGTGCTGAGTATGTAAATTGTAAAGATTTTGAAGGTATGCAAGTAATCATCTCTATCAAATGCCAAAACTTCATATTTATTAAAAATGTTATTTGGTTTCAAAGATGGATTATTAGGATTTGGATTTAAAATATATATTTTTAGTGACTTTGTTAGTCCCACATGATAAAATATATTTACCCTAATTTTTTGTGAGATAAAGAATTTTATATTCTTGAGAGCTTTTTTGGGAGATATTAGTCATTTATCTGTACTCATTAAATAAACTCCAAAAACTAGAAACCTGCAAAGTGTGAAGTTCTCAGTAGTTATTTAACATATATAAAATTATGTGTTTGTTATGTAAATAATAAAGTCTTGATCAGCATTTATGTAAAAAAGTCTTTAAATTCTCAGAAGGCTTCATTATTTATTTATTACGAGAAATGCTATTGGAACCC

Network for GWHGAAEX008245

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF03638.14	TCR	106	141	3.00E-11
PF03638.14	TCR	192	227	5.90E-13

Protein Sequence

Gene family

Gene family	subfamily
Transcription Factors Family	CPP

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	8.080
SRP064423	SRR2545915	Juvenile tuber	9.980
SRP108465	SRR5643513	five period of Gastrodia elata	5.970
	SRR5643514	five period of Gastrodia elata	5.540
	SRR5643515	five period of Gastrodia elata	6.070
	SRR5643524	five period of Gastrodia elata	6.050
	SRR5643525	five period of Gastrodia elata	4.440
	SRR5643528	five period of Gastrodia elata	4.690
	SRR5643658	five period of Gastrodia elata	5.180
	SRR5643659	five period of Gastrodia elata	8.880
	SRR5643660	five period of Gastrodia elata	8.740
	SRR5643661	five period of Gastrodia elata	8.990
	SRR5643662	five period of Gastrodia elata	8.980
	SRR5643663	five period of Gastrodia elata	9.140
	SRR5643664	five period of Gastrodia elata	10.190
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	6.530
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	9.840
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	6.970
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	8.840
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	7.940
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	7.780
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	7.820
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	7.050
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	5.870
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	6.310
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	5.750
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	5.750
SRP279888	Gastro	Gastrodia elata tuber	9.72
	Juven	Juvenile tuber	13.00
	Mother_Gastro	Mother tuber of Gastrodia elata	7.39
	Mother_Juven	Mother tuber of Juvenile	9.80