Detail information of GWHGAAEX008250/evm.TU.scaffold_212.35


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|383455371|ref|YP_005369360.1|6.00E-10hypothetical protein COCOR_03385 [Corallococcus coralloides DSM 2259]
KOGKOG23387.00E-69Transcriptional effector CCR4-related protein
nrgi|672145041|ref|XP_008796427.1|0PREDICTED: carbon catabolite repressor protein 4 homolog 6-like isoform X1 [Phoenix dactylifera]
Swissprottr|Q8VYU4|CCR4F_ARATH1.00E-107Carbon catabolite repressor protein 4 homolog 6
trEMBLtr|G7I6D2|G7I6D2_MEDTR3.00E-150Carbon catabolite repressor-like protein {ECO:0000313|EMBL:AES58957.2}
TAIRAT5G113507.00E-69DNAse I-like superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000212776723829432+
Transcript Sequence

Network for GWHGAAEX008250

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03372.22Exo_endo_phos1318431.30E-22
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms31.430
SRR2545915Juvenile tuber35.230
SRP108465SRR5643513five period of Gastrodia elata13.840
SRR5643514five period of Gastrodia elata15.360
SRR5643515five period of Gastrodia elata14.860
SRR5643524five period of Gastrodia elata14.980
SRR5643525five period of Gastrodia elata17.780
SRR5643528five period of Gastrodia elata15.050
SRR5643658five period of Gastrodia elata19.390
SRR5643659five period of Gastrodia elata11.940
SRR5643660five period of Gastrodia elata14.030
SRR5643661five period of Gastrodia elata13.820
SRR5643662five period of Gastrodia elata14.970
SRR5643663five period of Gastrodia elata15.520
SRR5643664five period of Gastrodia elata17.040
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_119.200
SRR6049655Rhizomagastrodiae_C368-T10_good_124.170
SRR6049656Rhizomagastrodiae_C368-T07_good_119.450
SRR6049657Rhizomagastrodiae_C368-T07_good_120.280
SRR6049658Rhizomagastrodiae_C368-T04_good_118.340
SRR6049659Rhizomagastrodiae_C368-T04_good_123.920
SRR6049660Rhizomagastrodiae_C368-T01_good_120.980
SRR6049661Rhizomagastrodiae_C368-T04_good_121.070
SRR6049662Rhizomagastrodiae_C368-T01_good_114.310
SRR6049663Rhizomagastrodiae_C368-T01_good_117.110
SRR6049664Rhizomagastrodiae_C368-T10_good_116.870
SRR6049665Rhizomagastrodiae_C368-T10_good_116.870
SRP279888GastroGastrodia elata tuber 17.82
JuvenJuvenile tuber19.15
Mother_GastroMother tuber of Gastrodia elata 24.85
Mother_JuvenMother tuber of Juvenile 17.86