Detail information of GWHGAAEX008251/evm.TU.scaffold_212.36


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|160903244|ref|YP_001568825.1|6.00E-151glutamate dehydrogenase [Petrotoga mobilis SJ95]
KOGKOG22500Glutamate/leucine/phenylalanine/valine dehydrogenases
nrgi|743755526|ref|XP_010912000.1|0PREDICTED: NADP-specific glutamate dehydrogenase-like isoform X1 [Elaeis guineensis]
Swissprottr|P28998|DHE4_CHLSO3.00E-137NADP-specific glutamate dehydrogenase (Fragment)
trEMBLtr|M0TMU2|M0TMU2_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr8P05390_001}
TAIRAT1G517200Amino acid dehydrogenase family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000212834180881070-
Transcript Sequence

Network for GWHGAAEX008251

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02812.17ELFV_dehydrog_N2463743.80E-46
PF00208.20ELFV_dehydrog3926394.00E-63
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K00262E1.4.1.4, gdhA Metabolic pathways map01100
Microbial metabolism in diverse environmentsmap01120
Nitrogen metabolismmap00910
Pyrimidine metabolismmap00240
Arginine biosynthesismap00220

Gene Ontology

GO term OntologyName
GO:0055114Biological Processoxidation-reduction process
GO:0006520Biological Processcellular amino acid metabolic process
GO:0016491Molecular Functionoxidoreductase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms17.320
SRR2545915Juvenile tuber11.690
SRP108465SRR5643513five period of Gastrodia elata8.190
SRR5643514five period of Gastrodia elata8.180
SRR5643515five period of Gastrodia elata7.670
SRR5643524five period of Gastrodia elata8.100
SRR5643525five period of Gastrodia elata11.990
SRR5643528five period of Gastrodia elata10.910
SRR5643658five period of Gastrodia elata12.540
SRR5643659five period of Gastrodia elata6.880
SRR5643660five period of Gastrodia elata7.920
SRR5643661five period of Gastrodia elata7.870
SRR5643662five period of Gastrodia elata8.180
SRR5643663five period of Gastrodia elata9.380
SRR5643664five period of Gastrodia elata8.080
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_110.860
SRR6049655Rhizomagastrodiae_C368-T10_good_111.290
SRR6049656Rhizomagastrodiae_C368-T07_good_19.210
SRR6049657Rhizomagastrodiae_C368-T07_good_113.380
SRR6049658Rhizomagastrodiae_C368-T04_good_112.410
SRR6049659Rhizomagastrodiae_C368-T04_good_117.100
SRR6049660Rhizomagastrodiae_C368-T01_good_111.320
SRR6049661Rhizomagastrodiae_C368-T04_good_111.630
SRR6049662Rhizomagastrodiae_C368-T01_good_19.290
SRR6049663Rhizomagastrodiae_C368-T01_good_19.710
SRR6049664Rhizomagastrodiae_C368-T10_good_18.060
SRR6049665Rhizomagastrodiae_C368-T10_good_18.060
SRP279888GastroGastrodia elata tuber 9.11
JuvenJuvenile tuber11.50
Mother_GastroMother tuber of Gastrodia elata 8.55
Mother_JuvenMother tuber of Juvenile 9.24