Gene detail

Detail information of GWHGAAEX008255/evm.TU.scaffold_212.41

Functional Annotation

Database	Orthologs	E value	Annotation
nr	gi\|695033832\|ref\|XP_009404400.1\|	1.34E-106	PREDICTED: uncharacterized protein LOC103987737 [Musa acuminata subsp. malaccensis]
trEMBL	tr\|M0T6Q4\|M0T6Q4_MUSAM	5.00E-107	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr6P13560_001}
TAIR	AT3G17350	6.00E-27	Unannotated protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000212	980727	983830	+

Transcript Sequence
>GWHTAAEX008255 CTGGAGGATCTGAATCCTTAGCCCATTTTTATGTTTCAATTTTATTTTGTTTTGTAGGCTTTTAACTTTGATTTCCTTTTTGTATTCATTTGTATTCTTATCTGTCGTATTTCCTGTAACTCCATATTAGGAGAAACTTTGTAATAATTTTTACTAAATATATCCACCAATTCCACTAGACTGAGAAACCTGCAATTTGCTAGTCTCACACACAAAAGTGTAGAGCTGGTATTTGTACACCGTCAAGAAAGCAGAATGAAGCCATCACCAAAGCTATTCTAGTTCTGTTTCTCTTGACGATGGCTATACTTTATTTTGGAGAGCTCTGTCTTAATAAGACATACCTCTCTGTCTCTCTGTGCCTCCCTGCTGCTCAGAGAGTTCTATAACAGAGAGCCCAAAGGCTTGATGGTTTGGCATTTTTTATGCGTAAAAATGAACTTTTGTATATGACAATGAGCATACTCTTTCTTTATTTTGTAGCATTTCTCTGTGCATATAATGATCACTTGGTATATTATAGCACACAAAAGTGCAGTAATACGGTGCGGTGCCGGTATTTGCGCCGACAAGGAAGCAGAATAAAGAAGCAATTGCCAAACCCACACTAATAATTAAAGTGAAGATCTCTATATTCCAAAACCCTAACACTGAAATCATCACTCGAGCTCCAAAAAAAGACGAAATAAGAAAGACGTACCTCTCTGTCCCTCAGCCATGGCCGCATTCCTCCTTGTAGTGTTGCTCCTCTGGTGCTGGTCGGCCTCGGCCTGCCGCACGTCCTGCGGGGTTCTGCCAATCCGGTACCCATTCTCCTTGGACGATGGCTGCGGCAGCCCTCTCTTCAGGCGACTGCTCTTGTGCCCTAATCCGTCCTCGTCGATGCTGTTCCTCCGCACCCCGTCGGGATCCTACCAGGTGATCTCGCTCTCCTACTCCGAGCAGGACACGCACCTGGTCGTATCCGATCCGGCCTCCTGGTCCTGCTCCCATCGATCGCAATCATCATCATCATCTGGAATCCCTTTCGCCCTAGATGCATCCACCCGCCTCTCGCTCTCCCCCAGAACCTCCTTCCTCTTCCTCAACTGCTCCCCCGAGGCCGTCCTCGCTCGGCCGCGGCCGCCCATCTGCGAGCGATTCCCGGACAGATGCGGCCTCTCGTGCGACTCGGCCGCCTACCTCTGCCGGAGCCCGCCCGGATGCCCTAACGCGCTCGCGGATCGATCGATGGCCTGCTGCTCTTACTTCCCCTCAGCCACGGAATCGATCCCGATGATGCTTCGGCATTGCGCGGGATACGCTGCTGTCATATGGACCGAATCCCCCGTCGGCGATGTTCCGGCCACCGCGCAGTATGCCATTCGCGTCGATTACCAGCTCCCCGTCACGGCCCAATGCCGCCGCTGCCTTGAGAGCCAAGGGATCTGTGGATTCGATCCCAATGATGTCCGCTTCCTCTGCATTTGCCCCCAAGGGAATTCCACCACTACTTGCCAAGAAGGCTTCTCGAGGCATAGATCATCTGCCAATGTTATAGTTGTGTCAGCAATTGCTGCTTCTTTATCTGGTCTGGTTGGTTTGGGAGCTCTTCTGCTACTGTACCTAAAGAAGATGAGGTCCAAAAATGTAGTCACTTGTGGGGTGCAGACTAATCAGAATAGGCTTTTCTAATATCTTCATCTCATGTTATACATACATAATTTTTTTTTTATTGAAATGTCTATTTTTGGGCTACAAGTTGAAGAGAAGAATATGATCCTCGAACAAGTTTTTATTTTGTATTTAATCTCCTAGAAAAATTTATATTTACGCATAATCCAACATCCATGTTTAAATATTTCATAATACAATATTCGATACATATATATTACTATTACGAAATTTAGAC

Network for GWHGAAEX008255

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module4

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF13947.5	GUB_WAK_bind	18	126	8.10E-14
PF14380.5	WAK_assoc	216	253	2.90E-07

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0030247	Molecular Function	polysaccharide binding

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	2.120
SRP064423	SRR2545915	Juvenile tuber	1.010
SRP108465	SRR5643513	five period of Gastrodia elata	2.390
	SRR5643514	five period of Gastrodia elata	2.660
	SRR5643515	five period of Gastrodia elata	2.820
	SRR5643524	five period of Gastrodia elata	3.550
	SRR5643525	five period of Gastrodia elata	4.390
	SRR5643528	five period of Gastrodia elata	2.790
	SRR5643658	five period of Gastrodia elata	3.570
	SRR5643659	five period of Gastrodia elata	3.610
	SRR5643660	five period of Gastrodia elata	4.040
	SRR5643661	five period of Gastrodia elata	3.660
	SRR5643662	five period of Gastrodia elata	3.280
	SRR5643663	five period of Gastrodia elata	3.430
	SRR5643664	five period of Gastrodia elata	4.340
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	4.180
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	4.150
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	3.430
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	4.860
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	3.700
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	4.490
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	3.190
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	3.770
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	4.330
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	3.250
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	3.380
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	3.380
SRP279888	Gastro	Gastrodia elata tuber	2.90
	Juven	Juvenile tuber	5.13
	Mother_Gastro	Mother tuber of Gastrodia elata	7.75
	Mother_Juven	Mother tuber of Juvenile	10.66