Gene detail

Detail information of GWHGAAEX008258/evm.TU.scaffold_212.45

Functional Annotation

Database	Orthologs	Annotation
nr	gi\|672183231\|ref\|XP_008811887.1\|	PREDICTED: uncharacterized protein LOC103722930 isoform X1 [Phoenix dactylifera]
trEMBL	tr\|M0TY20\|M0TY20_MUSAM	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr9P06610_001}
TAIR	AT5G44180	Homeodomain-like transcriptional regulator

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000212	1052747	1074598	-

Transcript Sequence
>GWHTAAEX008258 ATGGATATCGCCTGCAGCGGGGATGGAAATCCGAAACCGGAGGTGTGGAAGAGGCCCTTCGATCCCGAGGATAAGCCGCCTAAGCGTAAGATGAAGAGTCCCTACCAGTTGGAGATCCTTGAGAAGACTTATGCCGTGGAGACGTACCCTTCGGAGACTCTGAGGGCAGACCTGTCTGCGAAGACGGGTCTCTCAGATCGGCAGCTACAGATGTGGTTTTGCCACCGGAGGCTTAAGGACCGAAAGTACGCCCCTCTGAAGAGGGCAAAGAAAGTAGAGGAGCAGCATCTGATGCCACCGGTGCCTGGAAGGGAGGTGATTGCGGTGCAGGGCAGCTCATCTATGATCCCCAGCTCAATCCCCTTTGCCATAGGCAGTGGAGAGTTGAGGAAGGCAGTTGCAAGGGTATCACCTGCTGTTTCTAGGATCGGGGCCGAGGTTTCATATGGTGGTAAGAGGTACTATGAGCAACCAATCATGGCCCCGCAGACGATACAGCTATCAGTTTTGGAGCTTCGAATCATTGCCTCTATAGAGGCCCAGTTGGGGGAGCCCCTCAGGGAAGATGGGCCAATTCTTGGCATGGAATTTGATCCATTGCCCCCAGGAGCATTTGGAGCGCCTATTGAATCAGAGATGCCTACTCATTCAACTCATGTGCATGCTGCAAGTCTTCAATTCTTGGATAGGCTTGAGAGTTCAGGTGTGTCAACTCAGACAAAGCAGCTTACACGACCATATGATGGGAATAAGACAACATCGCTCTTGCCTGGCACAGAGCATTCTTTTTTACCTACTTCATTAAGTGGCAAAAGAAAAGCTTCAATCAGTGGAGCTCATGCAGTTCATTCTCAGGTTCTTCCCAGGGCGCTTCAGGAGTATCAGTTTCTTCCAGAGCAGCCAAGCATTCGATCTGAATCATATGAAAGGGTTCCACAGTCTCATTTTTATGACTCCCCACTTACTGCCTCTAGTACACGAATGCCATCTTTACCTACAGGAAACCAATATGTTCATGGAAATGATCAGGCGGCACCAACATACACTTTTCAGGGCCACATTTCAAGCTCTGGCCTTTTATCGCATCAAACTAGGGATCAGCTTTACACAAACGAATATGACAGTGCTCCACATGTTAGTCCTTTTGGAAACAACACATCTGATTCTCAATTTGGTATTCATCAAGCTCTGGGTTTGGACCCCTTTTTGCCATCTGAGAAAAGGGCTATCCGAGATGAAGAAACATGTCGAATTGAGAGAAAACGCAAGAGTGATGAATCAAGAGTTGCCAAGGAAGTTGAAGCACATGAGAAAAGAATAAGAAAAGAGCTGGAAAAGCAGGACATTATTAGAAGAAAGAAAGAAGACCAAATGCGAAGAGAAATGGAGAGGCTTGATCGTGATAGAAGAAAGGAAGAAGAGAGGATGCTACGTGAAAAGCAGCGAGAGGAGGAGAAGTTTTTGAGGGATCAAAGACGTGAAAACGAACGCAGGGAGAAAATCTTACTAAAAGAAAGTCGTCGAGCAGAGAAACTTAGGCGGAAAGAAGAATTGCGCAAGCAGAAGGAAGCAGCTAGACTCAAGGCTGCTAGTGAGAGAGCAACTGCTCGTAGAATTGCCAAGGAATCTATGGAATTGATTGAAGATGAACGTTTAGAATTGATGGAGCTAGCTACATCTAGGAAAGGCTTGCCTTCAATAATTTCATTAGACAGTGACACTCTTGAGCAACTTGATTCTTTTCGAGGCATGCTTCCTCTCTTTTGTCTGTTAAATGAGTTTCCTCCAAAATCAGTTAAATTGAAAAAACCTTTTTCAGTTCAGCCTTGGATCGAGTCTGAGGAGAATGTGGGGAACTTTCTTATGGCTTGGAAATTTTTATTTACATTTGCGGATGTCCTTGGACTATGGCCATTCACCCTCGATGAGTTTCTTCAATCCCTTCATGATTACGATTCACGATTGCTAGGAGAAATACATGTGGCGTTGCTTAAATCTATAATTAAAGACATTGAGGACGTTGCTAGGACTCCAGCTATCACACCGGGTGTTAATCAAAACTGTGTTGCTAATCCTAGTGGAGGTCATCCACATATTGTTGAGGGGGCGTATGCTTGGGGTTTCAATATCTGCAGCTGGCAGCAGCACTTGGATTGCTTGACATGGCCTGAAATATTACGACAATTTGCTCTTTCAGCTAGTTTTGGACTTCAATTGAAGAAAAGAAATGTTGAACGTACACATTTTCGCGATGACAATGAGGGTAATGATGGGGAGGATGTTATTTCTATTTTACGGAATGGTGCTGCTGCTGAAAATGCCGTTGCTTTGATGCAAGTGAGAGGATACAATCATGGGCGTAGGCCTCGACACCGCTTGACCCCTGGGACTGTCAAGTTTGCAGCGTTTCATGTACTTTCCCTTGAAGGAAGCAAAGGCTTAACAATTCTGGGAGTTGCAGAGAAGATCCAAAAATCTGGATTGCGGGATCTTACAACCAGCAAAACTCCAGAGGCATCTATAGCTGCTGCATTATCCCGGGATACAAAGCTCTTTGAAAGAACTGCTCCTTCAACATATTGCCTACGAGCTGCATTCAGAAAAAATCCTGCTGATGCTGAAGCAATACTAGCTGCCGCCAGGGAAAAAATACAGATATTTCAGGGTGGGTTGTCAGATTCTGAAGAAGTTGAGAAGGATGCAGAAGACGTTGAATTTGAGGGTGAAAGAGATGAAGACTCTGAATTTGAGGGTGCGGATGATCCTGAGGTTGATGATTGTAGCACAGAAGCCAAGGCGAGCAAGGATTTTCCATATATGGCTAATTTAAAAGGAGTTATGCCACAAGATTCAGTTTTTAATAATAAAAAAGGGGAAGTTAATTGCGATGGTATTGTTCTAACACCGCACAGCAGCTCAAGACGTTCTGTTAAAGACTTTCAGGTGGGAGCAATGGTACATTCTAGCCGAGCAGCACTTTCTGATGTTCAGTCAGCTGACATTTGTTTGAACTGCAATGGTGGGCCGGATACTAATATAGAAGATTCAGAAATTGATGAAAGTAACTTGGGTGATCCTTGGGTTCAGGGGCTTACGGAAGGTGATTATACTGATCTGAGTGTAGAGGAGCGTCTTAGCGCATTGGTTGCTTTGATTAGCGTGGCTATTGAGGGTAACTCGATACGAGTAATTCTCGAGGAACGCTTGGAAGCAGCTACTGCTCTAAAGAAACAGATGTGGGCAGAAGCACAACTTGACAAAAGGCGGTATAAAGAAGAATACTTGAACAAATCCCAGCATTCTGCTTTCTTGGCTTGCAAGCCCGAGACTGCTGCCCAGGCAATTATTGGTACAGAAGGAAGCCAGACTCCTCTGCAGCTACCTTTTACCAAGGAAAGTGATGGAAACTTTGACTTTCTCAGCAATGATCAATTTCATGATGTACAAAGTCCAAATAATAAAAATAGTATGCCGGTTGAGAGGGAGGCGGAGAGGGATGCATTAGGGCAGCAAGAATTCTCGGCAAATCCAGACTATTTTCCTCTTCAGCTTTACGGGCATGTTGCAGAGAAACCTCGCTTTCAGTTAAAGTCGTACATCGGTCACAAGGCAGAACAGCTCTATGTGTATAGGTCTCTGCCCTTGGGTCAAGACCGCAGGCGAAACAGATACTGGCTATTTTCAACATCTGCTTCTCCCAATGATCCTGGTTCTGGACGAATTTTTTTTGAGTCTAGAGATGGTTTCTGGAGGATAATTGATTCAGAGGAGACTTTCAACGCTCTTCTAGCTGCCCTGGACACACGCGGGATAAGGGAATCACATCTGCATTCTATGCTGCAAAGAATTGAACCAACCTTCAAGGAAGCACTTGCAAGGCATAATAAGCATGCAGCTTCAACAAGCACAACTGAGTTTTCATTTAAAGGAGGAACTGCTGATTTGATTCCCAGCCCAGATTGCAATACAGATCATGATAGTCCCAGCAGCACGTATAGTGGCGTTATCACAGACGCATTAGAGTGCTCAACATCCTTCAAGGTTGATTTAGGCCGGAGTAAGATGGAGAGAACTTTGGCACTAAAGAGATATCGGGGTTTTCTCAGATGGATGTGGAAAGAATGCTGCAACCCAATTGTATTTTGTGCCATGAAATATGGGCAGAAGAGATGCTCTGAGCTTCTTCAAACATGTGATATCTGTTTTCAATCTTACTTTATGGAAGAAAGGCACTGCTCGTCCTGCCACAGATCTTTCAAATCCTTTCACAAGTGTGATTCCATATTTACAGAGCTTGCTGTTTTTGGTGCAGCAAAAATGAAAATCGACAAAGAATCTGAGAGCCAAATTCTTGATTCTTCACTTCCTATCGGTGTTCGGTTGCTGAAGGTGCAACTATCCTTGATCGAGGTATCAATTCCTGCAGAAGCTCTTCAGCCTTTCTGGACAGAGAGCTATCGAAAATCATGGGGTGTCAAGCTGAACTCAGCATCATCTCCTGATGACTTACTTCAGCTTTTGACTTTATTAGAGGGTGCAATAAGGAGGGACTACTTATCTTCAAATTATGAAACAACAATTGAGCTGCTAAGTTCAGCTAAGGTTTCTGCTGCGGCTAACTGCACGTTAATTTCTGGCTCTGTGCCTGTGCTTCCATGGATTCCTGATACCACTGCAGCTGTGGCATTGAGACTGTTGGAGCTTGATGCGTCAATTTCATATATACCCCAGCAAAAATCAGCATCTCAGAAAGGACAAGAATCTAGAGATTTATTTAAGCCTTCAAGGTTTACAGTTGTCCCGAATATTCATGAGTTTGAACCGGTGGCAACGGGAACTCCGGAACAAGTTAATTATCAGGGAGATGGGAGATGGCTTGATTCCAGCATTATCGGACGCGGAAGAGGCCGCGGTAGAGGAAGCAGAGGCGGTCGTGTTTGCCGAAGGAGAGGGAGGGGTGGTCGGGGGACGAGAGGGAGCTCCGTCGCTCTCTCTCGGGCAGAGTTCAATGAAGAGTGCAATAACAACTTAGATAAACCGAGAAAGTACAATAGAAGAAGAGGAGGACGGAGCCGTGGACGAGGGCGCAGGCGCGGGCGGCGCTCTGCCAGGCCCCGTCAAAGACCTGAGGGTCGTCCCCCGGCTTCTGTACCCATGTTTTTCCATGGCTTTGGTGATGTCGGCGTCAGATTTAAGGAAGAAAGCATTGAGGAGTCTCCGGGAAGCTCTGCTGATGATGAATGGGGTATAGAGGCTAGAGCATACATCAAGGAAGATGATAATAGCGCCCCGTCCCAATCTGATACAAATGAACAAGCTTCTGGTGATGACTATGATGACGATGAGGTCGCAGGTTATACAAATACACAGTACAATCCTGGGCCTATAAGGATTCTTGGCGACGAAAGTGAAAATGATGCAGAAGAAGATGCAGAGGAAGAAGAGTATGGTGATCAAGGTACGCCGGAAGAGGACATGGATGCTGAGATTGAGGAAGATGAAGATATGGGTGATGATGATGAAGATGATAATGATATGACTGATGATGTTGATGATATTAATGGGGATGAAGAGGTGTCATCATCCTTCTCTTCAGGGTACAGTGATTAA

Network for GWHGAAEX008258

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00046.28	Homeobox	28	82	7.10E-15
PF02791.16	DDT	615	670	1.00E-16
PF05066.12	HARE-HTH	796	864	2.90E-15
PF15612.5	WHIM1	1026	1066	2.10E-07
PF15613.5	WSD	1211	1283	3.50E-13

Protein Sequence

>GWHPAAEX008258
MDIACSGDGNPKPEVWKRPFDPEDKPPKRKMKSPYQLEILEKTYAVETYPSETLRADLSAKTGLSDRQLQMWFCHRRLKDRKYAPLKRAKKVEEQHLMPPVPGREVIAVQGSSSMIPSSIPFAIGSGELRKAVARVSPAVSRIGAEVSYGGKRYYEQPIMAPQTIQLSVLELRIIASIEAQLGEPLREDGPILGMEFDPLPPGAFGAPIESEMPTHSTHVHAASLQFLDRLESSGVSTQTKQLTRPYDGNKTTSLLPGTEHSFLPTSLSGKRKASISGAHAVHSQVLPRALQEYQFLPEQPSIRSESYERVPQSHFYDSPLTASSTRMPSLPTGNQYVHGNDQAAPTYTFQGHISSSGLLSHQTRDQLYTNEYDSAPHVSPFGNNTSDSQFGIHQALGLDPFLPSEKRAIRDEETCRIERKRKSDESRVAKEVEAHEKRIRKELEKQDIIRRKKEDQMRREMERLDRDRRKEEERMLREKQREEEKFLRDQRRENERREKILLKESRRAEKLRRKEELRKQKEAARLKAASERATARRIAKESMELIEDERLELMELATSRKGLPSIISLDSDTLEQLDSFRGMLPLFCLLNEFPPKSVKLKKPFSVQPWIESEENVGNFLMAWKFLFTFADVLGLWPFTLDEFLQSLHDYDSRLLGEIHVALLKSIIKDIEDVARTPAITPGVNQNCVANPSGGHPHIVEGAYAWGFNICSWQQHLDCLTWPEILRQFALSASFGLQLKKRNVERTHFRDDNEGNDGEDVISILRNGAAAENAVALMQVRGYNHGRRPRHRLTPGTVKFAAFHVLSLEGSKGLTILGVAEKIQKSGLRDLTTSKTPEASIAAALSRDTKLFERTAPSTYCLRAAFRKNPADAEAILAAAREKIQIFQGGLSDSEEVEKDAEDVEFEGERDEDSEFEGADDPEVDDCSTEAKASKDFPYMANLKGVMPQDSVFNNKKGEVNCDGIVLTPHSSSRRSVKDFQVGAMVHSSRAALSDVQSADICLNCNGGPDTNIEDSEIDESNLGDPWVQGLTEGDYTDLSVEERLSALVALISVAIEGNSIRVILEERLEAATALKKQMWAEAQLDKRRYKEEYLNKSQHSAFLACKPETAAQAIIGTEGSQTPLQLPFTKESDGNFDFLSNDQFHDVQSPNNKNSMPVEREAERDALGQQEFSANPDYFPLQLYGHVAEKPRFQLKSYIGHKAEQLYVYRSLPLGQDRRRNRYWLFSTSASPNDPGSGRIFFESRDGFWRIIDSEETFNALLAALDTRGIRESHLHSMLQRIEPTFKEALARHNKHAASTSTTEFSFKGGTADLIPSPDCNTDHDSPSSTYSGVITDALECSTSFKVDLGRSKMERTLALKRYRGFLRWMWKECCNPIVFCAMKYGQKRCSELLQTCDICFQSYFMEERHCSSCHRSFKSFHKCDSIFTELAVFGAAKMKIDKESESQILDSSLPIGVRLLKVQLSLIEVSIPAEALQPFWTESYRKSWGVKLNSASSPDDLLQLLTLLEGAIRRDYLSSNYETTIELLSSAKVSAAANCTLISGSVPVLPWIPDTTAAVALRLLELDASISYIPQQKSASQKGQESRDLFKPSRFTVVPNIHEFEPVATGTPEQVNYQGDGRWLDSSIIGRGRGRGRGSRGGRVCRRRGRGGRGTRGSSVALSRAEFNEECNNNLDKPRKYNRRRGGRSRGRGRRRGRRSARPRQRPEGRPPASVPMFFHGFGDVGVRFKEESIEESPGSSADDEWGIEARAYIKEDDNSAPSQSDTNEQASGDDYDDDEVAGYTNTQYNPGPIRILGDESENDAEEDAEEEEYGDQGTPEEDMDAEIEEDEDMGDDDEDDNDMTDDVDDINGDEEVSSSFSSGYSD

Gene family

Gene family	subfamily
Transcription Factors Family	HB-other

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0006351	Biological Process	transcription, DNA-templated
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	88.110
SRP064423	SRR2545915	Juvenile tuber	56.660
SRP108465	SRR5643513	five period of Gastrodia elata	27.690
	SRR5643514	five period of Gastrodia elata	25.740
	SRR5643515	five period of Gastrodia elata	25.190
	SRR5643524	five period of Gastrodia elata	23.920
	SRR5643525	five period of Gastrodia elata	49.160
	SRR5643528	five period of Gastrodia elata	41.500
	SRR5643658	five period of Gastrodia elata	43.350
	SRR5643659	five period of Gastrodia elata	34.240
	SRR5643660	five period of Gastrodia elata	41.020
	SRR5643661	five period of Gastrodia elata	31.820
	SRR5643662	five period of Gastrodia elata	37.700
	SRR5643663	five period of Gastrodia elata	35.980
	SRR5643664	five period of Gastrodia elata	44.320
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	33.750
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	23.960
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	25.540
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	40.680
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	40.280
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	47.760
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	34.160
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	35.300
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	22.310
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	25.860
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	20.870
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	20.870
SRP279888	Gastro	Gastrodia elata tuber	34.70
	Juven	Juvenile tuber	45.19
	Mother_Gastro	Mother tuber of Gastrodia elata	37.60
	Mother_Juven	Mother tuber of Juvenile	65.20