Detail information of GWHGAAEX008261/evm.TU.scaffold_212.49


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|356572696|ref|XP_003554502.1|7.41E-29PREDICTED: uncharacterized protein LOC100785969 [Glycine max]
trEMBLtr|I1NAX9|I1NAX9_SOYBN3.00E-29Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA19G39050.1}
TAIRAT3G118901.00E-15Sterile alpha motif (SAM) domain-containing protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000021211512391157500+
Transcript Sequence

Network for GWHGAAEX008261

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF07647.16SAM_21532072.80E-07
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0005515Molecular Functionprotein binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms15.310
SRR2545915Juvenile tuber16.990
SRP108465SRR5643513five period of Gastrodia elata32.950
SRR5643514five period of Gastrodia elata31.800
SRR5643515five period of Gastrodia elata31.590
SRR5643524five period of Gastrodia elata32.020
SRR5643525five period of Gastrodia elata30.110
SRR5643528five period of Gastrodia elata25.550
SRR5643658five period of Gastrodia elata22.460
SRR5643659five period of Gastrodia elata37.620
SRR5643660five period of Gastrodia elata42.380
SRR5643661five period of Gastrodia elata45.700
SRR5643662five period of Gastrodia elata45.420
SRR5643663five period of Gastrodia elata34.120
SRR5643664five period of Gastrodia elata37.120
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_134.620
SRR6049655Rhizomagastrodiae_C368-T10_good_133.350
SRR6049656Rhizomagastrodiae_C368-T07_good_130.420
SRR6049657Rhizomagastrodiae_C368-T07_good_131.450
SRR6049658Rhizomagastrodiae_C368-T04_good_140.030
SRR6049659Rhizomagastrodiae_C368-T04_good_140.120
SRR6049660Rhizomagastrodiae_C368-T01_good_135.980
SRR6049661Rhizomagastrodiae_C368-T04_good_143.050
SRR6049662Rhizomagastrodiae_C368-T01_good_138.150
SRR6049663Rhizomagastrodiae_C368-T01_good_139.260
SRR6049664Rhizomagastrodiae_C368-T10_good_138.590
SRR6049665Rhizomagastrodiae_C368-T10_good_138.590
SRP279888GastroGastrodia elata tuber 37.11
JuvenJuvenile tuber28.51
Mother_GastroMother tuber of Gastrodia elata 38.24
Mother_JuvenMother tuber of Juvenile 33.03