Detail information of GWHGAAEX008262/evm.TU.scaffold_212.50


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG23975.00E-41Protein kinase C substrate, 80 KD protein, heavy chain
nrgi|743795157|ref|XP_010924383.1|1.21E-59PREDICTED: glucosidase 2 subunit beta isoform X1 [Elaeis guineensis]
Swissprottr|Q9FM96|PSL4_ARATH1.00E-41Glucosidase 2 subunit beta (Precursor)
trEMBLtr|M0SKJ4|M0SKJ4_MUSAM2.00E-50Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr4P02770_001}
TAIRAT5G563605.00E-41calmodulin-binding protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000021211583521185610+
Transcript Sequence

Network for GWHGAAEX008262

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF12999.6PRKCSH-like431529.30E-28
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K08288PRKCSH Protein processing in endoplasmic reticulum map04141

Gene Ontology

GO term OntologyName
GO:0005515Molecular Functionprotein binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms43.270
SRR2545915Juvenile tuber60.170
SRP108465SRR5643513five period of Gastrodia elata51.980
SRR5643514five period of Gastrodia elata55.850
SRR5643515five period of Gastrodia elata53.540
SRR5643524five period of Gastrodia elata51.660
SRR5643525five period of Gastrodia elata53.740
SRR5643528five period of Gastrodia elata43.720
SRR5643658five period of Gastrodia elata45.980
SRR5643659five period of Gastrodia elata50.770
SRR5643660five period of Gastrodia elata50.510
SRR5643661five period of Gastrodia elata46.450
SRR5643662five period of Gastrodia elata50.580
SRR5643663five period of Gastrodia elata50.590
SRR5643664five period of Gastrodia elata49.680
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_170.940
SRR6049655Rhizomagastrodiae_C368-T10_good_188.070
SRR6049656Rhizomagastrodiae_C368-T07_good_172.790
SRR6049657Rhizomagastrodiae_C368-T07_good_156.810
SRR6049658Rhizomagastrodiae_C368-T04_good_162.590
SRR6049659Rhizomagastrodiae_C368-T04_good_160.430
SRR6049660Rhizomagastrodiae_C368-T01_good_166.290
SRR6049661Rhizomagastrodiae_C368-T04_good_164.000
SRR6049662Rhizomagastrodiae_C368-T01_good_160.250
SRR6049663Rhizomagastrodiae_C368-T01_good_160.760
SRR6049664Rhizomagastrodiae_C368-T10_good_174.230
SRR6049665Rhizomagastrodiae_C368-T10_good_174.230
SRP279888GastroGastrodia elata tuber 78.74
JuvenJuvenile tuber52.66
Mother_GastroMother tuber of Gastrodia elata 49.66
Mother_JuvenMother tuber of Juvenile 36.24