Detail information of GWHGAAEX008266/evm.TU.scaffold_212.54


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG07993.00E-166Branching enzyme
nrgi|743772076|ref|XP_010916335.1|0PREDICTED: xylosyltransferase 1-like [Elaeis guineensis]
trEMBLtr|M0RJS7|M0RJS7_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr10P20020_001}
TAIRAT1G710703.00E-166Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000021211876801204433-
Transcript Sequence

Network for GWHGAAEX008266

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02485.20Branch543099.80E-59
Protein Sequence

Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyGT14

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0008375Molecular Functionacetylglucosaminyltransferase activity
GO:0016020Cellular Componentmembrane

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms64.780
SRR2545915Juvenile tuber55.480
SRP108465SRR5643513five period of Gastrodia elata35.050
SRR5643514five period of Gastrodia elata27.300
SRR5643515five period of Gastrodia elata32.730
SRR5643524five period of Gastrodia elata31.440
SRR5643525five period of Gastrodia elata54.190
SRR5643528five period of Gastrodia elata51.620
SRR5643658five period of Gastrodia elata50.290
SRR5643659five period of Gastrodia elata37.420
SRR5643660five period of Gastrodia elata36.670
SRR5643661five period of Gastrodia elata41.980
SRR5643662five period of Gastrodia elata35.250
SRR5643663five period of Gastrodia elata36.580
SRR5643664five period of Gastrodia elata35.850
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_142.340
SRR6049655Rhizomagastrodiae_C368-T10_good_133.770
SRR6049656Rhizomagastrodiae_C368-T07_good_138.830
SRR6049657Rhizomagastrodiae_C368-T07_good_143.620
SRR6049658Rhizomagastrodiae_C368-T04_good_143.670
SRR6049659Rhizomagastrodiae_C368-T04_good_152.210
SRR6049660Rhizomagastrodiae_C368-T01_good_142.270
SRR6049661Rhizomagastrodiae_C368-T04_good_142.540
SRR6049662Rhizomagastrodiae_C368-T01_good_134.980
SRR6049663Rhizomagastrodiae_C368-T01_good_135.110
SRR6049664Rhizomagastrodiae_C368-T10_good_135.900
SRR6049665Rhizomagastrodiae_C368-T10_good_135.900
SRP279888GastroGastrodia elata tuber 38.61
JuvenJuvenile tuber43.76
Mother_GastroMother tuber of Gastrodia elata 40.09
Mother_JuvenMother tuber of Juvenile 57.56