Detail information of GWHGAAEX008272/evm.TU.scaffold_213.3


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG31329.00E-117m3G-cap-specific nuclear import receptor (Snurportin1)
nrgi|672194244|ref|XP_008776243.1|0PREDICTED: snurportin-1 [Phoenix dactylifera]
trEMBLtr|M0TAQ8|M0TAQ8_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr6P27630_001}
TAIRAT4G248809.00E-117Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX000002164448776926-
Transcript Sequence

Network for GWHGAAEX008272

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K13151SNUPN, RNUT1 RNA transport map03013

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms6.090
SRR2545915Juvenile tuber8.480
SRP108465SRR5643513five period of Gastrodia elata5.910
SRR5643514five period of Gastrodia elata5.990
SRR5643515five period of Gastrodia elata5.990
SRR5643524five period of Gastrodia elata5.700
SRR5643525five period of Gastrodia elata6.520
SRR5643528five period of Gastrodia elata7.520
SRR5643658five period of Gastrodia elata6.980
SRR5643659five period of Gastrodia elata7.410
SRR5643660five period of Gastrodia elata7.040
SRR5643661five period of Gastrodia elata6.140
SRR5643662five period of Gastrodia elata6.320
SRR5643663five period of Gastrodia elata6.020
SRR5643664five period of Gastrodia elata6.330
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_18.160
SRR6049655Rhizomagastrodiae_C368-T10_good_18.660
SRR6049656Rhizomagastrodiae_C368-T07_good_16.430
SRR6049657Rhizomagastrodiae_C368-T07_good_17.680
SRR6049658Rhizomagastrodiae_C368-T04_good_15.970
SRR6049659Rhizomagastrodiae_C368-T04_good_18.030
SRR6049660Rhizomagastrodiae_C368-T01_good_17.530
SRR6049661Rhizomagastrodiae_C368-T04_good_16.140
SRR6049662Rhizomagastrodiae_C368-T01_good_18.380
SRR6049663Rhizomagastrodiae_C368-T01_good_16.370
SRR6049664Rhizomagastrodiae_C368-T10_good_18.180
SRR6049665Rhizomagastrodiae_C368-T10_good_18.180
SRP279888GastroGastrodia elata tuber 9.58
JuvenJuvenile tuber14.11
Mother_GastroMother tuber of Gastrodia elata 6.88
Mother_JuvenMother tuber of Juvenile 9.63