Detail information of GWHGAAEX008273/evm.TU.scaffold_213.4


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|225849786|ref|YP_002730020.1|2.00E-06inosine-5'-monophosphate dehydrogenase [Persephonella marina EX-H1]
KOGKOG176405'-AMP-activated protein kinase, gamma subunit
nrgi|695013906|ref|XP_009393753.1|0PREDICTED: SNF1-related protein kinase regulatory subunit gamma-1 isoform X1 [Musa acuminata subsp. malaccensis]
Swissprottr|Q8LBB2|KING1_ARATH0SNF1-related protein kinase regulatory subunit gamma-1
trEMBLtr|B9RAG9|B9RAG9_RICCO0AMP-activated protein kinase, gamma regulatory subunit, putative {ECO:0000313|EMBL:EEF51796.1}
TAIRAT3G485300SNF1-related protein kinase regulatory subunit gamma 1

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000021688788127902-
Transcript Sequence

Network for GWHGAAEX008273

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00571.27CBS2923361.10E-05
PF00571.27CBS3784252.60E-11
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms51.880
SRR2545915Juvenile tuber29.840
SRP108465SRR5643513five period of Gastrodia elata31.230
SRR5643514five period of Gastrodia elata30.020
SRR5643515five period of Gastrodia elata30.200
SRR5643524five period of Gastrodia elata27.970
SRR5643525five period of Gastrodia elata67.730
SRR5643528five period of Gastrodia elata68.720
SRR5643658five period of Gastrodia elata74.530
SRR5643659five period of Gastrodia elata23.180
SRR5643660five period of Gastrodia elata25.100
SRR5643661five period of Gastrodia elata24.850
SRR5643662five period of Gastrodia elata28.560
SRR5643663five period of Gastrodia elata22.090
SRR5643664five period of Gastrodia elata34.990
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_127.190
SRR6049655Rhizomagastrodiae_C368-T10_good_123.180
SRR6049656Rhizomagastrodiae_C368-T07_good_120.330
SRR6049657Rhizomagastrodiae_C368-T07_good_142.210
SRR6049658Rhizomagastrodiae_C368-T04_good_137.170
SRR6049659Rhizomagastrodiae_C368-T04_good_143.260
SRR6049660Rhizomagastrodiae_C368-T01_good_128.620
SRR6049661Rhizomagastrodiae_C368-T04_good_130.850
SRR6049662Rhizomagastrodiae_C368-T01_good_112.280
SRR6049663Rhizomagastrodiae_C368-T01_good_114.110
SRR6049664Rhizomagastrodiae_C368-T10_good_116.300
SRR6049665Rhizomagastrodiae_C368-T10_good_116.300
SRP279888GastroGastrodia elata tuber 39.64
JuvenJuvenile tuber26.92
Mother_GastroMother tuber of Gastrodia elata 30.75
Mother_JuvenMother tuber of Juvenile 34.67